Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g2268 ATGGCTTCTTCTTCTTATTCTTCACCAGTCATGGCTTTTGCAATTGCTTCTGCTGTTTCTGTGTTCTTCAGCTGCTTGGTTGGTGTTTCATCACAACATCAAAACGTTACGACTACTACGGATCCTTCTGAAGCAAGAACTTTGAATTCAATCTTCAGCAAATGGGGAATACCGGCATCAGCAAATGGCTGGAATATAAGCGGTGAACTATGCAGCGGACGGGCCATTGACATGACTACCGAGATCGATGCCAAAGAATTCAATCCGTTTATTAAATGCGAGAAGGTCTATGCATCATCTGTTGTTGGGGAAATCCCAGAAGAGCTGAACCTCGGCCAGAATTACTTGACGGGTTCTCTATCCCCAGCCATTGGAAATCTAACTCAAATGCAGTACATGACCTTTGGCATCAATTCCTTATCAGGGGAGCTTCCCAATGAATTGGGAAATCTTGCCGAGTTAATAGTATTGGGTCTTGGAGCCAACAACTTCTCTGGTTCTATCCCATCTGAGCTAGGGAAACTCGTGAAATTGGAACAACTCTATTTAGATAGTTCAGGACTTAGTGGCCAGATTCCTCCCACTTTTGCTAATCTTAAAAACCTGGCTACAGTATGGGCTTCAGATATGGAACTCACGGGCAGGATACCTGAATTCATAGGAAATTGGTCTAAGCTTACAGTCTTGAGGTTTCAGGGTAATTCTTTTGAAGGCCCAATACCATCATCATTCAGCAATCTCACTTCTCTTACAGAGTTGAGAATAAGTGAAATATCTAATGGGAGCTCCTCACTGGCATTTATAAGGAATATGAAGTCATTGACTGTCTTAGTACTGAGAAATAACAATATTTCTGATTCAATTCCATCCAATATCGGTGAATTTCTAGATTTGACCCAGCTGGATCTGAGCTTCAATAAAATCACAGGACAGATTCCGGGATCACTTTTCAATCTGAGTTCATTAACACACTTGTTCCTGGGAAATAACAAACTCAGCGGTACTATCCCTGCTCAGTTAAGCCAAACTCTTTCCAATATAGACTTGTCCTACAACAATCTATCAGGGAGCCTCCCCTCTTGGGTAAACCGACAAAATTTACAACTAAATTTGGTTGCTAACAATCTGACAATAGAAGGTTCAAGTAGCAGTGGCCTTCCTTCTGGACTCAATTGTTTGCAGCAAAATTTTCCTTGTTTCCGTGGTGCTGGAAGATATTATAACTTTGCAATCAAGTGTGGCGGTCCTTCAATTACATCAGCAGAAGGAATTACTTATGAAAGAGATAATGAGACACTTGGCCCTGCAACTTATTTTGTTACGGATACTAGAAGATGGGCAGTTAGCAATGTTGGGTTATTTACTGCGTCAAACAATCCTCTTTACACAAGATTTGTATCCGATCAGTTCACTACTGTGGACTCAGAGCTCTTCCAGACAGCACGGCTATCAGCTTCTTCGTTAAGATATTATGGCCTGGGGCTGGAAAATGGGAAATATAACATTTCCCTCTATTTCGCAGAAACATCGATTCAATCTGCCACTACTACTTGGAAAAGTCTTGGAAGACGGGTCTTTGATATATATATCCAGGGGAATCGTGTTTTAAAGGATTTTGACATAAAAAAGAAAGCTGGGGGTGCCTCTTTTAGAGCTGTCCGAAGCGATTTTCAGGTTAATGTGTCAGAAAATTTTATTGAGATTCATCTCTTTTGGGCTGGAAAAGGGACTTGCTGCATACCAACTCAAGGTACTTATGGTCCTCTGATTTCAGCAATCAGCGCTACCCCAGATTTCATTCCCACGGTCAGTAACAAACCTCCAGGCAGTACAAAGAACAACACCGGTCTGATTGTGGGAATTGCTGTTGGTGTTGGAGTCCTAAGCTTTCTGTCTGTTCTAGTGGTTTTCTGTATCATCCAGAGAAGAAAGCGTCATGGAGATGGTGAAGAAGAGCTTTTAGGTATTGATACAAAGACATACACTTTCAGCTATTCTGAGTTAAAGAACGCTACAGATGATTTCAGTCCTGGCAACAAACTGGGAGAGGGAGGTTTCGGACCTGTTTATAAGGGAACACTTAATGATGGAAGAGTAATTGCTGTGAAACAACTATCTGTTCGATCTCATCAAGGAAAGAGCCAGTTCATAGCAGAGATTGCAACTATATCTGCTGTGCAACATCGCAATCTTGTTAAATTATACGGATGTTGCCTTGAAGGAGATAAAAGACTTCTTGTCTATGAGTATCTAGAAAACAAGAGTCTTGATCAAGCACTATTTGGAAATTGTTTAACTCTCAACTGGTCCACACGCTATGATATTTGCATGGGTGTAGCAAGAGGTTTAGCTTATCTTCATGAAGAGTCTCGGCTACGCATTGTGCACCGTGATGTAAAGGCTAGTAATATTCTGCTTGATGGCAACCTTGTCCCCAAAATATCTGATTTTGGTTTGGCCAAATTATACGATGATAAAAAGACCCATATAAGCACCCGTGTAGCCGGGACAATTGGATATCTTGCTCCGGAGTATGCCATGCGAGGGCACCTCACAGAGAAAGCAGATGTGTTTTCCTTTGGTGTTTCGGCCCTAGAGATAGTTAGTGGGAGGCCAAATTCTGATTCAAGCCTGGAAGGGGAGAAGATGTATCTTCTGGAATGGGCTTGGCAGCTGCATGAAAAGAGCAGTATAATTGAACTGGTAGATCCAAGACTGTCATCAGATTTCAATGAGGAAGAAGTTAAGAGAATTGTGGGGATAGCTCTTCTGTGCACTCAAACTTCACCATTGTCAAGGCCAGCAATGTCCCGCGTCGTGGCGATGCTTGCTGGAGATATGGAAGTGAGCACTGTAACTTCAAAGCCTGGTTACTTGACCGACTGGAAGTTTGATGATGAGTACACCTTCATGACTGGCTTGGCTACAAGGGGATCAGATACGAGTACAAGTACGACTCAATATAACTCATCCTCAACTGCAAGCCAATAG 2991 0.4223 MASSSYSSPVMAFAIASAVSVFFSCLVGVSSQHQNVTTTTDPSEARTLNSIFSKWGIPASANGWNISGELCSGRAIDMTTEIDAKEFNPFIKCEKVYASSVVGEIPEELNLGQNYLTGSLSPAIGNLTQMQYMTFGINSLSGELPNELGNLAELIVLGLGANNFSGSIPSELGKLVKLEQLYLDSSGLSGQIPPTFANLKNLATVWASDMELTGRIPEFIGNWSKLTVLRFQGNSFEGPIPSSFSNLTSLTELRISEISNGSSSLAFIRNMKSLTVLVLRNNNISDSIPSNIGEFLDLTQLDLSFNKITGQIPGSLFNLSSLTHLFLGNNKLSGTIPAQLSQTLSNIDLSYNNLSGSLPSWVNRQNLQLNLVANNLTIEGSSSSGLPSGLNCLQQNFPCFRGAGRYYNFAIKCGGPSITSAEGITYERDNETLGPATYFVTDTRRWAVSNVGLFTASNNPLYTRFVSDQFTTVDSELFQTARLSASSLRYYGLGLENGKYNISLYFAETSIQSATTTWKSLGRRVFDIYIQGNRVLKDFDIKKKAGGASFRAVRSDFQVNVSENFIEIHLFWAGKGTCCIPTQGTYGPLISAISATPDFIPTVSNKPPGSTKNNTGLIVGIAVGVGVLSFLSVLVVFCIIQRRKRHGDGEEELLGIDTKTYTFSYSELKNATDDFSPGNKLGEGGFGPVYKGTLNDGRVIAVKQLSVRSHQGKSQFIAEIATISAVQHRNLVKLYGCCLEGDKRLLVYEYLENKSLDQALFGNCLTLNWSTRYDICMGVARGLAYLHEESRLRIVHRDVKASNILLDGNLVPKISDFGLAKLYDDKKTHISTRVAGTIGYLAPEYAMRGHLTEKADVFSFGVSALEIVSGRPNSDSSLEGEKMYLLEWAWQLHEKSSIIELVDPRLSSDFNEEEVKRIVGIALLCTQTSPLSRPAMSRVVAMLAGDMEVSTVTSKPGYLTDWKFDDEYTFMTGLATRGSDTSTSTTQYNSSSTASQ 996
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g2268 996 SMART LRR_typ_2 271 295 IPR003591 -
Alju10g2268 996 SMART LRR_typ_2 151 175 IPR003591 -
Alju10g2268 996 SMART LRR_typ_2 319 343 IPR003591 -
Alju10g2268 996 Gene3D Phosphorylase Kinase; domain 1 637 750 - -
Alju10g2268 996 FunFam Leucine-rich repeat receptor-like protein kinase 406 597 - -
Alju10g2268 996 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 169 260 - -
Alju10g2268 996 FunFam Putative LRR receptor-like serine/threonine-protein kinase 751 955 - -
Alju10g2268 996 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 26 977 - -
Alju10g2268 996 ProSiteProfiles Protein kinase domain profile. 675 949 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju10g2268 996 SUPERFAMILY Protein kinase-like (PK-like) 658 960 IPR011009 -
Alju10g2268 996 Gene3D - 406 597 - -
Alju10g2268 996 FunFam Leucine-rich repeat receptor-like protein kinase 645 750 - -
Alju10g2268 996 ProSitePatterns Serine/Threonine protein kinases active-site signature. 794 806 IPR008271 GO:0004672|GO:0006468
Alju10g2268 996 MobiDBLite consensus disorder prediction 975 996 - -
Alju10g2268 996 Pfam Malectin domain 408 593 IPR021720 -
Alju10g2268 996 Pfam Protein tyrosine and serine/threonine kinase 678 943 IPR001245 GO:0004672|GO:0006468
Alju10g2268 996 CDD STKc_IRAK 681 943 - -
Alju10g2268 996 Gene3D Transferase(Phosphotransferase) domain 1 751 955 - -
Alju10g2268 996 FunFam Putative LRR receptor-like serine/threonine-protein kinase 261 384 - -
Alju10g2268 996 SMART serkin_6 675 943 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju10g2268 996 SUPERFAMILY L domain-like 107 381 - -
Alju10g2268 996 Gene3D Ribonuclease Inhibitor 100 377 IPR032675 -
Alju10g2268 996 Pfam Leucine rich repeat 273 332 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g2268 Alju-ChrAlju10 44246242 44265163 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g2268 130 966 Receptor kinase-like Gene Family AT1G56120 66.150 0.0 1144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Alju10g2268 PK_Tyr_Ser-Thr 2.4e-47 CL0016