Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g2258 ATGGGGAAAGGAAGAGCACCTTGCTGTGATAAAACGAAAGTGAAGAGAGGACCATGGAGTCCTGAAGAAGACCTTAAGCTCATTACCTTCATCCACAAACATGGCCATGATAACTGGAGAGCTCTTCCTAAACTTGCAGGATTGGTGAGATGTGGGAAAAGCTGTCGTTTGAGATGGATCAACTACTTGAGGCCTGATGTGAAGCGTGGCAATTTCTCCAAGGAAGAAGAGGACACCGTCATAAGGCTTCACCATACCTTTGGAAACAAGTGGTCAAAGATTGCATCTCATTTGCCAGGAAGGACTGACAATGAGATCAAGAACGTTTGGAACACACATCTCAAGAAAAGATTAAAGCCTAAGCCCTCACTATCCATCACCACTACTACTACTAATACTCTGTCCTCTGCTTCATCTTCTTCCTCTGAAAAAATGGAGCAAGACTCGGCAGAGAAACAAGTTAATGAAGCTATTAACAATAGCGTCGTCAGAGAGGACCCAAAAGAGTCACCAGCTTCAGTATCTTCCTCTGATCATTCATCATCAAAACAAGAGGAAGAAGATGAACAGATTTTAGAGTCCTTGCTTAAAGAAGATGAAGATCCTCTGCTCCAAACTCCAATGGATCCATTGGACTATGACATTTGGAACATTCTGGAGAATCCAGAATCCTTCCAGTCAAATGATTTTAAGGTCCCAAGTGCTTCTGAAAATGATGCAGACAAGAACAAGTGGTTCAGTGAGTTAGAGAATGAACTTGGATTGGGAACTTCAGATGGATTCAACCTAGCAATCAATGATGCTGACATGGATTTTCTGGAATCATCATGGTCCTCTTGGCCTGAAATTTACAATCTTTAA 861 0.4204 MGKGRAPCCDKTKVKRGPWSPEEDLKLITFIHKHGHDNWRALPKLAGLVRCGKSCRLRWINYLRPDVKRGNFSKEEEDTVIRLHHTFGNKWSKIASHLPGRTDNEIKNVWNTHLKKRLKPKPSLSITTTTTNTLSSASSSSSEKMEQDSAEKQVNEAINNSVVREDPKESPASVSSSDHSSSKQEEEDEQILESLLKEDEDPLLQTPMDPLDYDIWNILENPESFQSNDFKVPSASENDADKNKWFSELENELGLGTSDGFNLAINDADMDFLESSWSSWPEIYNL 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g2258 286 ProSiteProfiles Myb-like domain profile. 11 63 IPR001005 -
Alju10g2258 286 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 4 225 - -
Alju10g2258 286 SMART sant 15 65 IPR001005 -
Alju10g2258 286 SMART sant 68 116 IPR001005 -
Alju10g2258 286 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 63 IPR017930 -
Alju10g2258 286 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
Alju10g2258 286 MobiDBLite consensus disorder prediction 122 144 - -
Alju10g2258 286 Pfam Myb-like DNA-binding domain 69 114 IPR001005 -
Alju10g2258 286 Pfam Myb-like DNA-binding domain 16 63 IPR001005 -
Alju10g2258 286 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 118 IPR017930 -
Alju10g2258 286 SUPERFAMILY Homeodomain-like 14 110 IPR009057 -
Alju10g2258 286 CDD SANT 71 114 IPR001005 -
Alju10g2258 286 CDD SANT 18 63 IPR001005 -
Alju10g2258 286 FunFam Transcription factor RAX3 9 69 - -
Alju10g2258 286 Gene3D - 15 68 - -
Alju10g2258 286 MobiDBLite consensus disorder prediction 120 191 - -
Alju10g2258 286 Gene3D - 71 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g2258 Alju-ChrAlju10 44043583 44046878 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g2258 1 259 MYB Transcription Factor Family AT1G79180 44.828 2.67e-78 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Alju10g2258 Myb_DNA-binding 4.1e-15 CL0123