Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Alju10g2254 | ATGGCTTCTTCAACACAACCTATTTCTAAGGATGAGCCGGTTGTTACTGTGGATTGGCTTTATGCTAACCTTAAGGACCCTGACTTGAAGGTGCTGGATGCATCCTGGTACATGCCAGATGAGCAGAGGAACCCCATTCAAGAATATCAGGCTGCACACATTCCTGGTGCGCGTTTCTTTGACATAGACAGAATAGCAGATCAAACTACAGATTTGCCGCATATGTTGCCGTCAGAGGAAGCTTTTGCTGCTGCTGTGTCTGTTTTGAACATAGCAAACAAAGACAGAGTGGTTGTTTATGATGGCAAAGGAATATTTAGTGCACCTCGTGTCTGGTGGATGTTCCATGTGTTTGGGCATGACCAAGTTTGGGTATTAGATGGTGGACTGCCAAAATGGAGTGCATCTGGATATGACATCGAAACTAGTGCTTCTAGTGATAAATCCAGTGCTGCTACTGAAGCAGTAGAGAAAGTATATCAGGGACAGTCAGTTGACCCAATCACATTTCAGACTAAATTTCAGCCACATCTTGTTTGGTCCCTGCAACAGGTAAAGAGAAACATTGAGGAGAAAAGCTACCAGCACATAGATGCACGATCAAGGCCTAGGTTTGATGGAGTAGCACCAGAACCTCGTGAGGGTATACAAAGTGGTCATATACCTGGAAGCAAGTGCATTCCTTTCTTCCAGTTGTTGGACGCTTCACAGACACTGTTACCCGCAGATGAAATTAAGAAGCGAATTGATCAAGAAGCTATCTCTTTGGATGGCCCCATTGTTTCCTCATGTGGCACCGGCGTAACTGCTTGCATTCTTGTATTGGGCCTCCACCGTCTCGGAAAGTCTGACATTGCAGTCTATGATGGGTCTTGGACTGAATGGGCATTGCAATCCGATACGCCTAAAGAAACTTCATGA | 921 | 0.4528 | MASSTQPISKDEPVVTVDWLYANLKDPDLKVLDASWYMPDEQRNPIQEYQAAHIPGARFFDIDRIADQTTDLPHMLPSEEAFAAAVSVLNIANKDRVVVYDGKGIFSAPRVWWMFHVFGHDQVWVLDGGLPKWSASGYDIETSASSDKSSAATEAVEKVYQGQSVDPITFQTKFQPHLVWSLQQVKRNIEEKSYQHIDARSRPRFDGVAPEPREGIQSGHIPGSKCIPFFQLLDASQTLLPADEIKKRIDQEAISLDGPIVSSCGTGVTACILVLGLHRLGKSDIAVYDGSWTEWALQSDTPKETS | 306 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Alju10g2254 | 306 | SMART | rhod_4 | 15 | 139 | IPR001763 | - | |
| Alju10g2254 | 306 | SMART | rhod_4 | 180 | 301 | IPR001763 | - | |
| Alju10g2254 | 306 | Gene3D | - | 175 | 304 | IPR036873 | - | |
| Alju10g2254 | 306 | CDD | TST_Repeat_1 | 14 | 137 | - | - | |
| Alju10g2254 | 306 | ProSiteProfiles | Rhodanese domain profile. | 25 | 142 | IPR001763 | - | |
| Alju10g2254 | 306 | PANTHER | THIOSULFATE SULFERTANSFERASE | 9 | 305 | IPR045078 | GO:0016783 | |
| Alju10g2254 | 306 | CDD | TST_Repeat_2 | 181 | 296 | - | - | |
| Alju10g2254 | 306 | FunFam | Sulfurtransferase | 175 | 306 | - | - | |
| Alju10g2254 | 306 | Pfam | Rhodanese-like domain | 182 | 297 | IPR001763 | - | |
| Alju10g2254 | 306 | Pfam | Rhodanese-like domain | 16 | 135 | IPR001763 | - | |
| Alju10g2254 | 306 | FunFam | Sulfurtransferase | 7 | 149 | - | - | |
| Alju10g2254 | 306 | SUPERFAMILY | Rhodanese/Cell cycle control phosphatase | 12 | 144 | IPR036873 | - | |
| Alju10g2254 | 306 | ProSitePatterns | Rhodanese signature 1. | 49 | 60 | IPR001307 | GO:0004792 | |
| Alju10g2254 | 306 | SUPERFAMILY | Rhodanese/Cell cycle control phosphatase | 183 | 305 | IPR036873 | - | |
| Alju10g2254 | 306 | Gene3D | - | 8 | 153 | IPR036873 | - | |
| Alju10g2254 | 306 | ProSiteProfiles | Rhodanese domain profile. | 190 | 304 | IPR001763 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Alju10g2254 | Alju-ChrAlju10 | 44016027 | 44021379 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Alju10g2254 | 4 | 305 | Sulfurtransferasese or Rhodanese | AT1G79230 | 73.770 | 4.99e-177 | 490 |