Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g2253 ATGGCACTGACCACCTACTTCAACTGGGAAAGTAATCTTCAAGCTGATCTGAACCTAGGAGGGAGCTTCTTCAATGAAGCAACACCAGAAGAAGAAGTACTTGTTGCACCAGATTATTATTATAACTATAATAATAACCACCACCTCTTCCTTCCTTATTACTATAACTCACTCGATCTAAACACGTCCTATCTCGATCCATATAGTAACTTGCTTTACCCTCATGAACTTGTTCCCTATGATCCCTTCATGTATGAGAATCATTATGACAGCCTGCTTCCTTGTCCAAAACGGCAGAAGTGCTTGTCGTATGACGAGAATCTGACAATGATGGACATGATTGCACCAACGAATAATAGTTTCTTCGGTGGGAATAACATTGTTGTGCCGAAGGTTCCAGAGTTTTATTACGATGAGGTTGAAGTACTGGGGAATGGAGAGGGTACTGTGGCGGAGGCGGTGGTGGAAGGAGGGAGGAAGAAGAATGAGAAGACACAGCCGCCGCAGTTGGTGGTGTCGGCACAGAGCGTGGCGGCGAGAGAGAGGAGGAGGAAGATAACAGAGAAGACACAAGGGCTGGGAAAGCTGGTTCCTGGTGGCTCAAAGATGAACACAGCTGACATGCTTCATGCTGCTGCCAAGTATGTGAATTACTTGAAGGCTCAGGTTGCCATGCTTCAACTCATGGACCCACTCAAGGAAGATAACAAGGTATTCACTGCGAATGTAGAAATGCAGAAGCTGCTTGCTTGTCCAGTTGTTGAAGAGAAGATGTACATGGAAGAGAAATGCTTTGTTCCCAAAGAGTTTGCCACCAACTTGACAAATCATAAAGACATTCAATCAATACCGTCCATCCTTAAAGATCTTAATCAGTTTATTTCGACAGACACAGAGATTGAAGAACAGTGA 912 0.443 MALTTYFNWESNLQADLNLGGSFFNEATPEEEVLVAPDYYYNYNNNHHLFLPYYYNSLDLNTSYLDPYSNLLYPHELVPYDPFMYENHYDSLLPCPKRQKCLSYDENLTMMDMIAPTNNSFFGGNNIVVPKVPEFYYDEVEVLGNGEGTVAEAVVEGGRKKNEKTQPPQLVVSAQSVAARERRRKITEKTQGLGKLVPGGSKMNTADMLHAAAKYVNYLKAQVAMLQLMDPLKEDNKVFTANVEMQKLLACPVVEEKMYMEEKCFVPKEFATNLTNHKDIQSIPSILKDLNQFISTDTEIEEQ 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g2253 303 Gene3D - 173 232 IPR036638 GO:0046983
Alju10g2253 303 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 174 266 IPR045843 GO:0003700|GO:0006355
Alju10g2253 303 SMART finulus 176 225 IPR011598 GO:0046983
Alju10g2253 303 Pfam Helix-loop-helix DNA-binding domain 178 220 IPR011598 GO:0046983
Alju10g2253 303 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 174 227 IPR036638 GO:0046983
Alju10g2253 303 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 170 219 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g2253 Alju-ChrAlju10 44013186 44015648 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g2253 63 295 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G34820 37.190 6.84e-31 115