Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g2224 ATGAAATCGAACAGTGGCAAGAGGAAGTTTGAAGATGTGGAGGTAACTCAAAGAAGAATCACAAGGAGCATTACTTCTGGAAAAAGCTCATCATCAACAGACCAGATTACCATTTCGTCAGCTTCAACTGAAATTGATGACTATGACAAGCCCACACAACGTCCTATTGGACTCGACGGTGTACGTAAGCTTTGTGTGTGCAACTATTATGAGTGTGAGATGTGTTATAAAGTGGGAAGACTCCTTTGTTGTGAAAGTTGCCCAAGAGCATATCACTTGAAATGCCTGGGACTTGAGGCTGTTCCAGAAGGACACTGGGAATGTCCCAGATGTTGCGACGATTTTTCGAAGCCATTAAAATACCTTCTGAGGGATTTTAATGCTTCCAAGGAAAGCGATGAACCAGCTGCCCCAAAACTGAAATAA 426 0.4272 MKSNSGKRKFEDVEVTQRRITRSITSGKSSSSTDQITISSASTEIDDYDKPTQRPIGLDGVRKLCVCNYYECEMCYKVGRLLCCESCPRAYHLKCLGLEAVPEGHWECPRCCDDFSKPLKYLLRDFNASKESDEPAAPKLK 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g2224 141 SMART PHD_3 71 112 IPR001965 -
Alju10g2224 141 ProSitePatterns Zinc finger PHD-type signature. 65 111 IPR019786 -
Alju10g2224 141 PANTHER PHD FINGER PROTEIN 17 115 - -
Alju10g2224 141 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 66 136 IPR013083 -
Alju10g2224 141 SUPERFAMILY FYVE/PHD zinc finger 58 112 IPR011011 -
Alju10g2224 141 ProSiteProfiles Zinc finger PHD-type profile. 69 114 IPR019787 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g2224 Alju-ChrAlju10 43407291 43409380 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g2224 72 112 PHD Transcription Factor Family AT5G58610 51.220 8.20e-11 57.0