Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g2214 ATGGATATGGGAAGCGTACACTTTTTCAAACAAAAGACTATTTTAGTGACTGGAGCCACTGGTTTCTTAGCAAAAGTTTTTGTGGAGAAGTTATTAAGGATTCAATCAGATGTGAGGAAAGTGTATCTTCTTATCAGAGCATCAGATGATCATGCAGCAACTAAACGGTTCCGTGATGAGATCATAGGAAAGGATTTGTTCAAGGTTGTACGAGATCAGTTTGGGGAAGAATTTGATTCTTACATATCAAATAAGGTAGCTGCAATTGCTGGTGACGTTTCTGTTGGAAACTTGGGACTTGATGATGCAAATCTTGATAAGCTGTCGGAGGAAATACAAGTTATTGTGAACTCAGCTGCAATTACCAAATTTGATGAAAGATTTGACATCGCAATGAATGTTAACACGATGGGAGCTTTGAATGTCTTAAACTTCTCAAATAGGTGTCGACAGATACAAGTTCTTCTCCACGTATCAACTGCATATGTATGTGGGGAGGCTAAGGACAAAAAAGTAATAAGGGAAGAACCCTTTAAGATGGGTCAATCCTTGAAGAAGGTTACAGAATTAGACATTCACGCAGAAGTAAGTTTTATGAAGAACAGATTACAACAACTCCAAGAGGAGAATGCTGGTGAAGAGGTCATCTCAGCCGCAATGAAAGATTATGGAATTAAGAGGGCGAACTTATATGGATGGCCAAACATTTACGTATTTACGAAAGCAATGGGAGAAATGTTACTGTCACATCACAAAGATCAGATTCCTTTGGTCATCGTACGACCAACCATGGTGACCAGTACCTACAAAGAACCCTTTCCTGGCTGGATCGAAGGTCTTAGAACAGTAGATGCTGTAATTGGTGGCTATGGAAAAGGAAAACTAACTTGCTTTCCGGGTAGTCCCAAGACAATTTTAGACTTGATACCTGCGGACATGGTAATAAATTGTATGATGGCGGCAATGGCGAATCATTCGAATGAAGCAGCTTCAGAGAATTACGTATACCATGTTGGTTCATCGTCAAGAAATCCTTTTAGCCTTGGATCTCTTCCTAATATCTTGCATCTTTATTTCAAAAATAACCCTTCATTGACCACCAAAAGTGGAAAGCCTATCATGATTCGATCCAAGGGAAAATTAGCAAGCAACGCCCGTTTCCATATTTATTTGTTCCTTCAATATTTCCTACCACTCATGGGATTAAATTTAGCGAACAAAGTGCTTTGCGGAGGCTTCCAAGATGTTTACAATGGTGGGCACAGGAAAATCAAAATGGTGATACGAATGGCTGGTCTTTACAAACCTTATGTGTTTTTTAAGGCTACCTTTGACGACACCAACACAAAAGCTACGGAGGATGGCAACAAATTGGGAGAGCGTTGGAAGTATCGATTGGAGTGA 1404 0.3981 MDMGSVHFFKQKTILVTGATGFLAKVFVEKLLRIQSDVRKVYLLIRASDDHAATKRFRDEIIGKDLFKVVRDQFGEEFDSYISNKVAAIAGDVSVGNLGLDDANLDKLSEEIQVIVNSAAITKFDERFDIAMNVNTMGALNVLNFSNRCRQIQVLLHVSTAYVCGEAKDKKVIREEPFKMGQSLKKVTELDIHAEVSFMKNRLQQLQEENAGEEVISAAMKDYGIKRANLYGWPNIYVFTKAMGEMLLSHHKDQIPLVIVRPTMVTSTYKEPFPGWIEGLRTVDAVIGGYGKGKLTCFPGSPKTILDLIPADMVINCMMAAMANHSNEAASENYVYHVGSSSRNPFSLGSLPNILHLYFKNNPSLTTKSGKPIMIRSKGKLASNARFHIYLFLQYFLPLMGLNLANKVLCGGFQDVYNGGHRKIKMVIRMAGLYKPYVFFKATFDDTNTKATEDGNKLGERWKYRLE 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g2214 467 Pfam Male sterility protein 16 318 IPR013120 -
Alju10g2214 467 CDD FAR-N_SDR_e 12 363 - -
Alju10g2214 467 Coils Coil 196 216 - -
Alju10g2214 467 PANTHER MALE STERILITY PROTEIN 2-RELATED 6 452 IPR026055 GO:0080019
Alju10g2214 467 Gene3D - 7 374 - -
Alju10g2214 467 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 12 342 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g2214 Alju-ChrAlju10 43170097 43176467 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g2214 1 444 Acyl Lipid Metabolism Gene Families AT3G44560 50.559 1.44e-149 432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju10g2214 10 43170097 43176467 Alju10g2214 10 43170097 43176467 ECH