Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g2168 ATGCACTGTCTTACAGCATGTGGTACCCCAAGGCATCTCAAAATGCCAAACCAAGCTGCAAAAAAGACATTTGAATCCCAGAAATTAGAACTACCAAGCAAGAAGATGATGTCTGCAAATCCTGATCCTCAAGCCACCTCATCTACAGTAACCACAGGAATCATAAAGAGTCTTCCTTCGCCTTCGAGGACTAATAACCATGGCTACGGCAGTAGTGGCAATAGTTCGCGTAGTGACAGCTTAGAAAGCACAAGTATACATATCAAGCCACATACAGGTGGTGATGTAAGGTGGGATGCCATTCTCATGGTTTCTAGAGGAGGAGGCCCTCTTGATCTTAGCCGTTTTCGGTTTCTCAAGCGAGTCGGCTATGGGGATATTGGGTCTGTGTATCTTGTAGAACTCAGAAGGACTAAGACTTGTTTTGCCATGAAAGTGATGAACAAGGAAGCTCTTATAAGTAGGAATAAACTACTAAGAGCACAGACAGAGAGGGAGATTCTTCAACTTCTTGACCACCCTTTCTTACCTACTCTGTATTCTTATTTTGAAACTGATAAGCATTCTTGTTTGGTCATGGAGTTCTGCAGTGGAGGTAACCTCCACTCTCTTCGGCAGAAGCAGCCAAACCAGCATTTCACAGAAGAAGCAGCACGGTTTTATGCTTCAGAGATATTGTTAGCTATTGAGTACCTGCATATGCTAGGCATAGTGTACAGAGACTTGAAGCCAGAGAATGTCTTAGTCAGAGATGAAGGCCACATAATGCTCTCGGATTTCGATCTATCCCTTCGCTGCTCGGTCAATCCAACACTGATCAAGTCTTCATCTGTCCATGCAAGTGGGAGCAGCAATAGCAGTAGTAGTGGTTCTGGGGTCATTTTAGAAGACCATCAAACAGCGCAGACTAGTACTCAGCCATCAACTTTCTTCCCACGCATTTTACCAACAAAGAAAAATCGAAAATCGAAGTCAGATTTTGGCCTCCTAAACGGAGGAACTGCCCTCCCTGAATTCATGGCAGAGCCTTCAGATGTGAGGTCAATGTCCTTTGTAGGGACACATGAATACCTTGCACCTGAAATCATCAGAGGAGAAGGTCATGGCAGTGCAGTAGATTGGTGGACTTTTGGGATCTTCTTGTACGAGCTTTTACTCGGGACAACGCCCTTCAAAGGCGCCGGGAATCGGGCTACACTTTACAATGTTGTAGGACAGCCCTTAAGGTTCCCAGAAACTCCACAGATAAGTTCTGCTGCAAAAGACCTTATCAAAGGATTGCTCGTGAAGGAACCTCCGAAACGAATTGCATACATAAGGGGTGCCACAGAAATAAAACAGCACCCATTTTTCGAGGGGATGAACTGGGCACTAGTCAGAAGTGCCATGCCTCCTCATATACCAGATCCTGTAGATTTTTCCAAGTATGCTGGCAATGATTCAGCAGCAGCAGACAAGGTGATAGATATGGCAAAAGATAAAAATGGCCCACATGGTCCAGCTGATTCTTCTTACATAGATTTTGAATATTTTTAA 1536 0.4447 MHCLTACGTPRHLKMPNQAAKKTFESQKLELPSKKMMSANPDPQATSSTVTTGIIKSLPSPSRTNNHGYGSSGNSSRSDSLESTSIHIKPHTGGDVRWDAILMVSRGGGPLDLSRFRFLKRVGYGDIGSVYLVELRRTKTCFAMKVMNKEALISRNKLLRAQTEREILQLLDHPFLPTLYSYFETDKHSCLVMEFCSGGNLHSLRQKQPNQHFTEEAARFYASEILLAIEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVNPTLIKSSSVHASGSSNSSSSGSGVILEDHQTAQTSTQPSTFFPRILPTKKNRKSKSDFGLLNGGTALPEFMAEPSDVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLLGTTPFKGAGNRATLYNVVGQPLRFPETPQISSAAKDLIKGLLVKEPPKRIAYIRGATEIKQHPFFEGMNWALVRSAMPPHIPDPVDFSKYAGNDSAAADKVIDMAKDKNGPHGPADSSYIDFEYF 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g2168 511 PANTHER FLIPPASE KINASE 1-RELATED 46 476 - -
Alju10g2168 511 Gene3D Transferase(Phosphotransferase) domain 1 199 468 - -
Alju10g2168 511 MobiDBLite consensus disorder prediction 1 88 - -
Alju10g2168 511 CDD STKc_phototropin_like 114 472 - -
Alju10g2168 511 ProSitePatterns Serine/Threonine protein kinases active-site signature. 237 249 IPR008271 GO:0004672|GO:0006468
Alju10g2168 511 FunFam Serine/threonine-protein kinase AGC1-7 344 469 - -
Alju10g2168 511 MobiDBLite consensus disorder prediction 39 87 - -
Alju10g2168 511 Gene3D Phosphorylase Kinase; domain 1 111 198 - -
Alju10g2168 511 Pfam Protein kinase domain 338 451 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju10g2168 511 Pfam Protein kinase domain 117 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju10g2168 511 SUPERFAMILY Protein kinase-like (PK-like) 100 473 IPR011009 -
Alju10g2168 511 ProSiteProfiles Protein kinase domain profile. 116 451 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju10g2168 511 FunFam serine/threonine-protein kinase D6PK-like 200 267 - -
Alju10g2168 511 SMART serkin_6 116 451 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju10g2168 511 FunFam Serine/threonine-protein kinase D6PK-like 114 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g2168 Alju-ChrAlju10 42150161 42152225 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g2168 81 511 AGC Kinase Gene Family AT1G79250 71.429 0.0 640
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Alju10g2168 Pkinase 2.9e-38 CL0016