Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g2125 ATGAATTTTTTGGGCTGCAAGGATCATCATCGTCGTCGTCATCATCAAGACCTTAATATTAATGGTGATGACATGCACAGCAACAACCACACTTCCACCAGCCGTTCCTCCGACTCCGGCGACCCTTCCCACGACTCGAAATGGGCGCCTAAGCTCCTCACCGAGTGTGCTAAAGCCATCTCCGAAGGCGACTCCCCCAAAATCCATCATCTTCTTTGGATGCTCAACGAGCTCGCTTCGCCTTACGGCGATTGCGATCAGAAATTGGCCTCCTACTTCCTCCAAGCCCTATTTTGCAAAGCCACCGACTCCGGTCCACGGTGCTGCCAGACTCTCTCCTCCATCGCCGACAAATCTCACTCCTTCGATTCCTCCAGAAAGCTCATCCTCAAGTTTCAGGAGGTCAGCCCGTGGACAACCTTCGGACATGTCGCTTCAAACGGTGCTATTCTAGAAGCCCTCGACGGCGAGACCAAGCTTCACATAATTGACATAAGCAACACTCTCTGCACGCAGTGGCCTACCCTATTGGAAGCCCTGGCCACCCGAAACGACGAAACTCCGCACCTTAAGCTCACAGTGGTTTTGACGGGCGGCACCGGAAGCGTAGGGGCGGGGTCGGTGATGAAGGAAGTGAGGCAAAGGATGGAGAAGTTCGCGAGGCTAATGGGAGTGCCGTTCGAGCTGAAGATGATAAGTGGACTGAATCACCTGGGAGAGCTGACCAAAGAGGGCTTGGGAGTGCAAGAAGAGGAGGCCGTGGCGGTGAACTGCGTCGGAGCGCTAAGAAGAGTGAGAGTGGAAGAGCGAGGAGGAGTGATCGGAATGTTCAGATCGCTGAATCCGAGGGTGGTGACGGTGGTGGAGGAGGAAGCCGATTTCTCGAGCAATAGGAATGAGTTTGTGAAGGGGTTTGAAGAGTGCTTGAGGTTCTTCTCACTATACTTTGAGACTCTAGAGGAGAGCTTTGGCGCGACGAGTAACGAGAGATTGATGCTCGAGAGAGAGTGTTCGAGGAGCATAGTTAGGGTTTTGGCATGCGGCGACGAAGAGGAGGAGGGTGGAGGAGATGAAGAGTGTGAGAGGAGGGAGAGAGGGAGGCAGTGGAGTGAGAGGATGAGGCATGAGTTCCGGACGGTGCCGTTCAGCGACGACGTTTTGGATGATGTCAAGGCATTGCTCAAGAGGTATAGACCGGGGTGGTCGCTGGCGGCGGCGCCTCCATCGGAAGACGGAATTTACTTGAATTGGAAGGATGAGCCTGTGGTTTGGGCCTCCGCATGGAAACCCTAG 1293 0.5437 MNFLGCKDHHRRRHHQDLNINGDDMHSNNHTSTSRSSDSGDPSHDSKWAPKLLTECAKAISEGDSPKIHHLLWMLNELASPYGDCDQKLASYFLQALFCKATDSGPRCCQTLSSIADKSHSFDSSRKLILKFQEVSPWTTFGHVASNGAILEALDGETKLHIIDISNTLCTQWPTLLEALATRNDETPHLKLTVVLTGGTGSVGAGSVMKEVRQRMEKFARLMGVPFELKMISGLNHLGELTKEGLGVQEEEAVAVNCVGALRRVRVEERGGVIGMFRSLNPRVVTVVEEEADFSSNRNEFVKGFEECLRFFSLYFETLEESFGATSNERLMLERECSRSIVRVLACGDEEEEGGGDEECERRERGRQWSERMRHEFRTVPFSDDVLDDVKALLKRYRPGWSLAAAPPSEDGIYLNWKDEPVVWASAWKP 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g2125 430 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 47 422 IPR005202 -
Alju10g2125 430 Pfam GRAS domain family 51 429 IPR005202 -
Alju10g2125 430 MobiDBLite consensus disorder prediction 17 46 - -
Alju10g2125 430 MobiDBLite consensus disorder prediction 22 39 - -
Alju10g2125 430 ProSiteProfiles GRAS family profile. 40 429 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g2125 Alju-ChrAlju10 40865725 40867017 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g2125 26 430 GRAS Transcription Factor Family AT4G37650 52.732 2.96e-145 422
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Alju10g2125 GRAS 8.6e-94 CL0063