Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g2117 ATGGGCTTCTTTCCTCAACTATCGCTTTATTCTGCATTATATATTATTCCTTTAGCTATCCATTGCCTTTTTCTCAGTATATCATCTTCAACAGCTCTAGACATCACCACAGATACTGAAGCTTTGATCTCATTTAAATCTCAGTTGAGTAATATTGATACTCCTCACCCCTTATCATCTTGGAACCAGAGTTCATCATCACCATGCAACTGGTATGGTGTAACCTGCAATAGGTTAGGCCAAAGAGTGATAGGCTTAAATCTTTCAAGCCTAAGACTCTCAGGCCAGTTAAGCCCTTATATAGGTAACCTTTCTTTTCTTGAGTCCCTCCAGTTGCAGGATAACCAGTTTACAGGAGTGATTCCAGAGCAAATTGGCCATCTCATTCGGTTAAGAGCTCTAGATTTTAGCTCTAACAGAATAGAGGGCATGCTTCCTTCAAACATCACTCGCTTGGCCAACCTCGTTAAGCTCAACTTATCCTCAAACAGTATAATCAGCCAAATTCCTCGAGATATTGACAGGTTGACAAAGCTTCAAACCTTAAAATTGGGAAGCAATAGATTGTATGGTGTAGTTCCACCAACTCTAGGGAACATTTCATCTCTCACAAATATCAGTTTTGGCACAAACAGTCTAAGTGGTGGGATTCCTAGTGAATTAGGTAGGCTCAAGAACTTAATTGAGCTTGACCTCACTATTAACAATCTCACTGGGATTATTCCTTCTTCTATATATAACTTATCTTCCCTAGTTAACTTGGCTGTCGCTGCCAACGATTTTTGGGGTGATATTCCTCAGGATGTTGGACACAGACTTCCAAAACTTCTAGTGTTCAATTTCTGCTTTAATAGATTCACAGGCAGAATTCCTTGGTCTTTGCACAACCTCACCAACATTCGAGTTATTCGCATGGCTTCCAACCTTTTGGAAGGAACCGTGCCACCAGGTCTTGGAAATCTCCCCTTCCTTCGTATGTACAATATAGGGTACAATAGGATAGTAAGCTCAGGAGATAGAGGCCTAGACTTCATTACTTCACTGGCAAACAGCACCCACTTGAACTTTCTTGCAATTGATGGCAATAGGCTGGAAGGTGTAATTCCAGATACCATTGGAAATCTCTCCAAGGTTCTCTCAAAATTATACATGGGAGGGAATCGCTTCCATGGAAACATACCCCCCTCGATTGGAAATCTTATAGGCTTGAGTTTATTAAACTTGAGTCACAATGCGATTTCAGGAGAAATTCCTTTTGAGTTAAGCCAACTGGAGAAACTACAAGAGCTCAGTCTGGCTGGGAATCTGATATCTGGAAGTATTCCAAACTCCCTTGGCCGTCTCAAGAAGCTGAACAATCTTGATTTGTCGTGCAATGAGCTTGAGGGTGAAATACCTTCAAGTTTTGGGAATTTTCAGGAGATTCAGTCCATGGACTTATCACACAACAAGCTCAATGGAAGCATACCAAGAGCAGTTCTAAGTCTCTCATCTCTGAGCACTGTTTTAAATGTGTCTATGAACTTTTTAAGTGGATCTTTGCCTCAAGATGTAGGGAGTTTGGTCAGTGTTTCTGCCTTAGACTTCTCTGATAACATTTTAGTTGGTGAAATCCCCAGCTCAATAAGTCGTTGTCTAAGCCTAGAAAAGCTATTTTTGGCCCGAAACATGCTTTCAGGTCTTATTCCAAAAGCTCTTGGAAGCATCAAAGGCTTGGAAATTCTAGACCTTTCCACCAACCAACTCTCTGGATCCATTCCTGTTGAACTTCAAGATCTAGATGCCCTTCAGTTATTGAACCTTTCATATAATAACTTAGAAGGAGTCATACCCAGTGATGGAGTTTTCACAAATCTCTCCTCTTTCCATTTTGAAGGCAATAAGAAACTGTGTTTACATTCCCCTTGTGTTAATCAAAGACATGGCAGAAAGATGTTCATAATTTGTATCACCATAGCTATTGTGGCGACGTTGATACTATGTTTTACACTTGGCTTGCTGTTGAATATGAGGAGCAGAAAATCAAAGGCAACGACACCATTTGAAATGGCAAAACCAAATCATCCAATGGTCTCTTATGACGAGCTTCGACAAGCCACTGGGGACTTCAGCCTAGAAAATTTACTGGGAAGCGGAAGCTTTGGTTGGGTCTATAGGGGCTATCTTGCTGAAGGGAGTATTAGTACTAGTGTTGCAGTAAAAGTACTAGATACTTTAAGGACAGGATCCTTGAAGAGTTTCTTTGCAGAATGTGAGGCTTTGAGGAATGTAAGGCATCGAAATCTGGTTAAGCTAATCACTTCATGTTCTAGTATAGACTTCAAGAACAAGGAATTTCTGGCTTTGGTTTATGAATTTATATGTAATGGCAACTTGGATGATTGGATCAAGGGAAAGAGAAAGCATTCAAATGGAAATGGGTTGAATCTTATGGAGAGACTGAACATTGCTATTGATGTTGCTTGTGCATTGGATTATCTGCACAATGACACTGAAACTCCTATTGTGCACTGTGATTTGAAGCCTAGCAATATTCTTCTGTGTGAAGATATGACAGCAAAGGTGGGTGATTTTGGATTGGCTAGAGTGTTGATCGAAAGACCAACTAATCAAGTCTCGATAAGTTCCACTCATGTTCTCAAAGGTTCAATCGGTTACATACCTCAAGAGTATGGATGGGGAGAAAAGCCATCAGTAGCAGGAGATACATACAGTTTTGGGATTGTGTTGCTAGAACTCTTTTCTAGGAGGAGCCCAACAGATGATAGCTTCACAGGTGGTTCAAGCTTAACAAGATGGATTCAATCAGCTTTTCCAGACAAGACTGAGCAAGTCATAGACCCTCAGCTTTTGTCACATATTTTCCACAATGACCTTGGTGATGATAAAGGTCCAAATCTACAACTTGATTGTGTGACTGCTGTTTTGGGAGTTGGATTATCCTGCGCTGCAGATTCTCCAGAGGGACGCCTTAAGATGAAAGATGTTGTTGCAAAATTAAAACGTGTCAGAGATGATCTTTCCAAGCTCAATCAAAACAAGGGTCCTTTAGAGCATTAG 3060 0.4065 MGFFPQLSLYSALYIIPLAIHCLFLSISSSTALDITTDTEALISFKSQLSNIDTPHPLSSWNQSSSSPCNWYGVTCNRLGQRVIGLNLSSLRLSGQLSPYIGNLSFLESLQLQDNQFTGVIPEQIGHLIRLRALDFSSNRIEGMLPSNITRLANLVKLNLSSNSIISQIPRDIDRLTKLQTLKLGSNRLYGVVPPTLGNISSLTNISFGTNSLSGGIPSELGRLKNLIELDLTINNLTGIIPSSIYNLSSLVNLAVAANDFWGDIPQDVGHRLPKLLVFNFCFNRFTGRIPWSLHNLTNIRVIRMASNLLEGTVPPGLGNLPFLRMYNIGYNRIVSSGDRGLDFITSLANSTHLNFLAIDGNRLEGVIPDTIGNLSKVLSKLYMGGNRFHGNIPPSIGNLIGLSLLNLSHNAISGEIPFELSQLEKLQELSLAGNLISGSIPNSLGRLKKLNNLDLSCNELEGEIPSSFGNFQEIQSMDLSHNKLNGSIPRAVLSLSSLSTVLNVSMNFLSGSLPQDVGSLVSVSALDFSDNILVGEIPSSISRCLSLEKLFLARNMLSGLIPKALGSIKGLEILDLSTNQLSGSIPVELQDLDALQLLNLSYNNLEGVIPSDGVFTNLSSFHFEGNKKLCLHSPCVNQRHGRKMFIICITIAIVATLILCFTLGLLLNMRSRKSKATTPFEMAKPNHPMVSYDELRQATGDFSLENLLGSGSFGWVYRGYLAEGSISTSVAVKVLDTLRTGSLKSFFAECEALRNVRHRNLVKLITSCSSIDFKNKEFLALVYEFICNGNLDDWIKGKRKHSNGNGLNLMERLNIAIDVACALDYLHNDTETPIVHCDLKPSNILLCEDMTAKVGDFGLARVLIERPTNQVSISSTHVLKGSIGYIPQEYGWGEKPSVAGDTYSFGIVLLELFSRRSPTDDSFTGGSSLTRWIQSAFPDKTEQVIDPQLLSHIFHNDLGDDKGPNLQLDCVTAVLGVGLSCAADSPEGRLKMKDVVAKLKRVRDDLSKLNQNKGPLEH 1019
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g2117 1019 ProSitePatterns Serine/Threonine protein kinases active-site signature. 835 847 IPR008271 GO:0004672|GO:0006468
Alju10g2117 1019 Gene3D Ribonuclease Inhibitor 33 96 IPR032675 -
Alju10g2117 1019 Gene3D Ribonuclease Inhibitor 97 338 IPR032675 -
Alju10g2117 1019 Coils Coil 993 1013 - -
Alju10g2117 1019 ProSiteProfiles Protein kinase domain profile. 703 1003 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju10g2117 1019 SUPERFAMILY Protein kinase-like (PK-like) 681 1000 IPR011009 -
Alju10g2117 1019 Gene3D Phosphorylase Kinase; domain 1 665 786 - -
Alju10g2117 1019 FunFam Putative leucine-rich repeat receptor-like protein kinase family protein 234 340 - -
Alju10g2117 1019 FunFam LRR receptor-like serine/threonine-protein kinase EFR 674 786 - -
Alju10g2117 1019 SUPERFAMILY L domain-like 378 632 - -
Alju10g2117 1019 FunFam LRR receptor-like serine/threonine-protein kinase EFR 341 641 - -
Alju10g2117 1019 Pfam Protein tyrosine and serine/threonine kinase 705 998 IPR001245 GO:0004672|GO:0006468
Alju10g2117 1019 FunFam Leucine-rich repeat receptor-like protein kinase 35 195 - -
Alju10g2117 1019 SUPERFAMILY L domain-like 36 335 - -
Alju10g2117 1019 Gene3D Transferase(Phosphotransferase) domain 1 787 1015 - -
Alju10g2117 1019 SMART LRR_typ_2 496 521 IPR003591 -
Alju10g2117 1019 SMART LRR_typ_2 593 618 IPR003591 -
Alju10g2117 1019 SMART LRR_typ_2 224 247 IPR003591 -
Alju10g2117 1019 SMART LRR_typ_2 152 175 IPR003591 -
Alju10g2117 1019 SMART LRR_typ_2 424 448 IPR003591 -
Alju10g2117 1019 SMART LRR_typ_2 176 199 IPR003591 -
Alju10g2117 1019 SMART LRR_typ_2 297 321 IPR003591 -
Alju10g2117 1019 SMART LRR_typ_2 104 128 IPR003591 -
Alju10g2117 1019 SMART LRR_sd22_2 176 208 - -
Alju10g2117 1019 SMART LRR_sd22_2 424 456 - -
Alju10g2117 1019 SMART LRR_sd22_2 224 250 - -
Alju10g2117 1019 SMART LRR_sd22_2 128 157 - -
Alju10g2117 1019 SMART LRR_sd22_2 569 590 - -
Alju10g2117 1019 Pfam Leucine rich repeat N-terminal domain 37 77 IPR013210 -
Alju10g2117 1019 Pfam Leucine rich repeat 107 165 IPR001611 GO:0005515
Alju10g2117 1019 Pfam Leucine rich repeat 547 606 IPR001611 GO:0005515
Alju10g2117 1019 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 787 1013 - -
Alju10g2117 1019 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 241 999 - -
Alju10g2117 1019 SMART serkin_6 703 972 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju10g2117 1019 Gene3D Ribonuclease Inhibitor 339 640 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g2117 Alju-ChrAlju10 40680455 40684588 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g2117 37 1009 Receptor kinase-like Gene Family AT3G47570 42.427 0.0 710
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Alju10g2117 PK_Tyr_Ser-Thr 3.6e-37 CL0016