Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g2116 ATGGCCTTCTTTTCTCACATGTCTCTTCCTTTGGCATTATATGTTTTTCCTTACATCATTTTTCTCTATATATCATCATCAACCGCTCTAGACATCACCACAGATACAGAAGCTTTGATCTCGTTCAAGTCTCAATTGAGTAATACAGAAGCTTTATCTTCTTGGAATCACAGTTCATCATCACCCTGCAACTGGCATGGTGTAACCTGCAACAAGCTTCGTCAAAGAGTAATAGGCTTAAATCTTTCAGGCCTAAGACTCTCAGGTCAGTTAGGTCCTAGTTTAGGTAATCTCACTTTTCTTGAGTCTATCCAGTTGCAGAAAAACCAATTCACAGGAGTGATTCCTGAGCAAATTGGCCATCTAGTTCGGTTAAGAGCTCTAGACATGAGTTCTAACAGTATAGAGGGTATGCTTCCTTCAAACATCACTCGCTTGACTAAGCTTTTGACACTTGACTTATCCGCAAACACAATAGCCAGCAAAATTCCTCAAGATATTGACAGCTTGACAGAGCTTCGAGTCTTGAGATTAGGAAGCAATAGATTGTATGGAATAGTTCCACCAACTCTAGGAAATATTTCATCTCTTGCAAATATCAGTCTTGGCACAAACAGTCTAAGTGGCGGGATTCCTAGTGAATTAGGTAGGCTCAAGAACTTAATTGAGCTTGACATCACTATTAATAAACTCACTGGGACTATTCCTTCTTCTATATATAACTTATCTTCCCTAGTTAACTTGGCTATCGCTTCCAACGATTTTTGGGGTGATATTCCTCAGGATGTTGGACACAGACTTCCAAAACTTCTAGTGTTCAATTTCTGCTTTAATAGATTCACAGGCAGAATTCCTTGGTCTTTGCACAACTTCACCAACATTCGAGTTATTCGCATGGCTTCCAACCTTTTGGAAGGAACCGTGCCACCAGGTCTTGGAAATCTCCCCTTCCTTCGTATGTACAATATTGGGTACAATAGGATAGTAAGCTCAGGAGATAGAGGCCTAGACTTCATTACTTCACTGGCAAACAGCACCCACTTGAACTTTCTTGCAATTGATGGCAATAGGCTGGAAGGTGTAATTCCAGATACCATTGGAAATCTCTCCAAGGTTCTCTCAAAATTATACATGGGAGGGAATCGCTTCCATGGAAACATACCCCCCTCGATCGGAAATCTTATAGGCTTGAGTTTATTAAACTTGAGTCACAATGCGATCTCAGGAGAAATTCCTGTCGAGTTAAGCCAACTGGAGAACCTACAAGAGCTCAGTCTGGCTGGGAATCAGATATCTGGAAGTATTCCAAATTCCCTTGGGCGTCTCCAAAAGCTGAACAGTCTTGATTTATCAAGGAATGAGCTTGTAGGTGAAATACCTTCAAGTTTTGGAAATTTTAAAGACATTGATTCCATGGACTTATCTTACAACAAGCTCAATGGAAGCATACCTAGAGAAGTAGTCAGTCTCTCATCTCTCACCAGTTATTTAAATGTTTCTAATAACCTTTTAAGTGGATCTTTGCCTCAAGAAGTAGGGAGTTTGGTCAGTGTTTCTGCCTTAGACTTCTCTGATAACATTTTAGTTGGTGAAATCCCCAGCTCAATCAGCAACTGTATAAGCCTAGAATATCTATTTTTGGCACGAAATATGCTTTCTGGTCTTATTCCAAAAGCTCTTGAAAGCATCAGAGGCTTGGAAATTCTAGACCTTTCCTCCAACCAAATCTCTGGATCTGTTCCTGTTGATCTTCAAAATCTAAATGCCCTTCGGTTATTGAACCTTTCTTACAATGACTTAGAAGGAGTCATTCCCAGTGGTGGAGTTTTCAAAAATAACACCTCTTTCCATTTTGATTTTGAAGGCAATAAGAAACTGTGTTCGCTCTCCTCATGTGTTACTCAAGGGCAAGGAAGAAAGATGCTCATAATTTATATCACCGTACCTGTTGTGGTAACATTGATACTATGTTTCGCGTTTGGCTTTCTGTTGTATGTGGGAAGAAGAAAAACAAAGGCAATAACGCCACTTGAAATGGCAAAGCCATATCATCCAATGGTCTCTTATGATGAGCTTCGACGAGCGACTGGACACTTCAGCCAAGAAAATTTACTAGGAATTGGAAGTTTTGGTTCAGTCTATAGAGGCTGTCTTTGTGAAGGGGATGCTGTTGCAGTAAAGGTCCTAGATACTTCAAGATCAAGCTCCTTGAAGAGTTTCTATGCAGAATGTGAGGCATTAAGGAATGTAAGGCATCGAAATCTGGTTAAGCTAATCACATCATGTTCTAGTATAGACTTCAAGAACAAAGAATTTCTGGCTTTGGTTTATGAATTTATCTGTAATGGCAACTTGGATGATTGGATCAAGGGAAAGAGAGGGCATGCAAATGGAAATGGGTTGAATCTCATGGAGAGACTGAACATTGCTTTGGATGTAGCTTGTGCATTGGATTATCTACACAATGACACTGAAACTCCTATTGTGCATTGTGATTTGAAGCCTAGCAATATTCTTCTGTGTGAAGATATAACTGCCAAGGTGGGTGACTTTGGATTGGCTAGAGTGTTGATTGAAACACCAACTAATCAAGTCTCAATAAGCTCCACTCATGTTCTCAAAGGTTCAATCGGTTACATACCTCCAGAGTATGGATGGGGAGAAAAGCCATCAGTAGCAGGAGATACATACAGTTTTGGGATTGTGTTGTTAGAGCTCTTTTCTGGGAGGAGCCCAACAAATGAGAGCTTCACAGGGAGCTTAAGCTTAACAAGATGGATTCAATCAGCATTCCCAGACAAGACTGAGCAAGTCATAGATCCTCAGCTTCTGTCAGACATGTTCCACAATGATCTTGCTGATGATAAAGGACGAAATCTACAACTTGATTGTTTGATTGCAATTTTGGGAGTTGGCTTATCCTGCACAGCAGATTCTCCAGATGGACGCCTTAAGATGAAAGATGCTGTTGCAAAATTAAAACTTGTCAGGGATAATCTTTCCAAACTCAATCAAAACAATGGCCCTTCAGGGCCTTAG 3039 0.4038 MAFFSHMSLPLALYVFPYIIFLYISSSTALDITTDTEALISFKSQLSNTEALSSWNHSSSSPCNWHGVTCNKLRQRVIGLNLSGLRLSGQLGPSLGNLTFLESIQLQKNQFTGVIPEQIGHLVRLRALDMSSNSIEGMLPSNITRLTKLLTLDLSANTIASKIPQDIDSLTELRVLRLGSNRLYGIVPPTLGNISSLANISLGTNSLSGGIPSELGRLKNLIELDITINKLTGTIPSSIYNLSSLVNLAIASNDFWGDIPQDVGHRLPKLLVFNFCFNRFTGRIPWSLHNFTNIRVIRMASNLLEGTVPPGLGNLPFLRMYNIGYNRIVSSGDRGLDFITSLANSTHLNFLAIDGNRLEGVIPDTIGNLSKVLSKLYMGGNRFHGNIPPSIGNLIGLSLLNLSHNAISGEIPVELSQLENLQELSLAGNQISGSIPNSLGRLQKLNSLDLSRNELVGEIPSSFGNFKDIDSMDLSYNKLNGSIPREVVSLSSLTSYLNVSNNLLSGSLPQEVGSLVSVSALDFSDNILVGEIPSSISNCISLEYLFLARNMLSGLIPKALESIRGLEILDLSSNQISGSVPVDLQNLNALRLLNLSYNDLEGVIPSGGVFKNNTSFHFDFEGNKKLCSLSSCVTQGQGRKMLIIYITVPVVVTLILCFAFGFLLYVGRRKTKAITPLEMAKPYHPMVSYDELRRATGHFSQENLLGIGSFGSVYRGCLCEGDAVAVKVLDTSRSSSLKSFYAECEALRNVRHRNLVKLITSCSSIDFKNKEFLALVYEFICNGNLDDWIKGKRGHANGNGLNLMERLNIALDVACALDYLHNDTETPIVHCDLKPSNILLCEDITAKVGDFGLARVLIETPTNQVSISSTHVLKGSIGYIPPEYGWGEKPSVAGDTYSFGIVLLELFSGRSPTNESFTGSLSLTRWIQSAFPDKTEQVIDPQLLSDMFHNDLADDKGRNLQLDCLIAILGVGLSCTADSPDGRLKMKDAVAKLKLVRDNLSKLNQNNGPSGP 1012
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g2116 1012 ProSitePatterns Protein kinases ATP-binding region signature. 705 727 IPR017441 GO:0005524
Alju10g2116 1012 ProSiteProfiles Leucine-rich repeat profile. 565 588 IPR001611 GO:0005515
Alju10g2116 1012 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 230 992 - -
Alju10g2116 1012 ProSiteProfiles Protein kinase domain profile. 699 996 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju10g2116 1012 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 780 1006 - -
Alju10g2116 1012 SMART LRR_typ_2 539 562 IPR003591 -
Alju10g2116 1012 SMART LRR_typ_2 218 242 IPR003591 -
Alju10g2116 1012 SMART LRR_typ_2 170 193 IPR003591 -
Alju10g2116 1012 SMART LRR_typ_2 587 612 IPR003591 -
Alju10g2116 1012 SMART LRR_typ_2 563 586 IPR003591 -
Alju10g2116 1012 SMART LRR_typ_2 418 441 IPR003591 -
Alju10g2116 1012 SMART LRR_typ_2 122 146 IPR003591 -
Alju10g2116 1012 SMART LRR_typ_2 394 417 IPR003591 -
Alju10g2116 1012 SMART LRR_typ_2 490 515 IPR003591 -
Alju10g2116 1012 SMART LRR_typ_2 442 465 IPR003591 -
Alju10g2116 1012 SMART serkin_6 699 965 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju10g2116 1012 Pfam Leucine rich repeat N-terminal domain 34 71 IPR013210 -
Alju10g2116 1012 Gene3D Ribonuclease Inhibitor 335 635 IPR032675 -
Alju10g2116 1012 Pfam Leucine rich repeat 373 431 IPR001611 GO:0005515
Alju10g2116 1012 Pfam Leucine rich repeat 541 600 IPR001611 GO:0005515
Alju10g2116 1012 Coils Coil 986 1006 - -
Alju10g2116 1012 FunFam LRR receptor-like serine/threonine-protein kinase EFR 335 637 - -
Alju10g2116 1012 FunFam Putative leucine-rich repeat receptor-like protein kinase family protein 228 334 - -
Alju10g2116 1012 SMART LRR_sd22_2 146 169 - -
Alju10g2116 1012 SMART LRR_sd22_2 563 589 - -
Alju10g2116 1012 SMART LRR_sd22_2 418 450 - -
Alju10g2116 1012 SMART LRR_sd22_2 218 244 - -
Alju10g2116 1012 SMART LRR_sd22_2 170 196 - -
Alju10g2116 1012 SUPERFAMILY Protein kinase-like (PK-like) 678 994 IPR011009 -
Alju10g2116 1012 Pfam Protein kinase domain 700 915 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju10g2116 1012 Gene3D Ribonuclease Inhibitor 30 90 IPR032675 -
Alju10g2116 1012 Gene3D Ribonuclease Inhibitor 91 334 IPR032675 -
Alju10g2116 1012 FunFam Leucine-rich repeat receptor-like protein kinase 32 189 - -
Alju10g2116 1012 ProSiteProfiles Leucine-rich repeat profile. 420 442 IPR001611 GO:0005515
Alju10g2116 1012 Gene3D Phosphorylase Kinase; domain 1 680 779 - -
Alju10g2116 1012 Pfam Leucine Rich Repeat 444 466 IPR001611 GO:0005515
Alju10g2116 1012 SUPERFAMILY L domain-like 35 329 - -
Alju10g2116 1012 SUPERFAMILY L domain-like 345 630 - -
Alju10g2116 1012 ProSitePatterns Serine/Threonine protein kinases active-site signature. 828 840 IPR008271 GO:0004672|GO:0006468
Alju10g2116 1012 FunFam LRR receptor-like serine/threonine-protein kinase EFR 670 779 - -
Alju10g2116 1012 Gene3D Transferase(Phosphotransferase) domain 1 780 1008 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g2116 Alju-ChrAlju10 40675199 40678353 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g2116 34 1002 Receptor kinase-like Gene Family AT3G47570 42.026 0.0 714
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Alju10g2116 Pkinase 2e-37 CL0016