Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g2103 ATGGAAAAGCAGAGAAACCAAAATCACTACCACCACCGTAACCCCGACAACAAGAACCACCACCACCGCCACCGTCAGACTTGGGGCACGTGGGAGGACCTTCTCCTGGCCTCCGCCGTCAAACGCCATGGTTCTAACAACTGGGACACCGTCGCCATGGAGATCCAGAACCGCACCAACCTCCCTCACCTCCTCACCACCGCCCGCAACTGCGAGCAGAAATTCCTCGATCTCAAACGCCGATTCACCGCCCAATGCAACGACGCCGTTCGGTATCCTCCGGAGAACGGCGCTCCCGACGTCGACGTCGTCGATCACGTTCCCTGGCTCGACGAATTGCGTAAGCTCAGGGTAGCTGAGCTCCGGCGAGAGGTCCAACGTCACGACGTCTCCATTCTGTCGTTGCAGCACAAGGTGAAGAGATTAGAGGAAGAGAGAGAAAAAAGCTTGAAGGAGAATGACGCAGAACGAGATGAGAAACCAGATCTGGAAAACTCCGGGAAACCGGAAACCGACGAAAAAAACGGAGGAGGAGGAGGAAAACCTGAACCGGAAAATTCTGAACCGGGGAGGCGGGTCGATGACGATGGAAATGATAATAGTAACGATAATAATAATAACAATAACTGCAGTACTAATAAGCTTCCAGAAGGGGACGACTCCGACCGGGACAACCAATCAGTTAATGAGTCTAATTCGACCGGTTCAAGATCCGCGGGAGAGAAAACCGGGGAGGAAGATGTGAAGCCTGAACCGCCTCCGGCTCATCCCGGTCCGAAGAAACCTGATCCGAGTGCGGATAAAAAAATCGAGGACTCGTCCGAGTTGAGAGACTCGGTGGCCCACTCGGAAGGGGGAGGGACGAGGGAGAGCGGCGAGGTGCAGAGCTCGGCGAGCTTAACGAGGAAGAGGAAGTCGCGAAAGAGGAAGAAGGTCTCCGGCAGCGGAGGCAACGGCGAGGAGGAGGCGCCGGAGAACGACGGGGTGGCGGCGAAATCACAACCGTTGGTTGGCCTCTTGGAGCTGATCAAAGGACATGAGAACAGCTCGTTGTTCGAGCGCCGTCTTGAAAGCCAGGAGGAATGGGAAAAATACAAAAGCATGGTACGTGAGCACGTGGACTTAGAAATCATACAAACGCGCCTTCGAAATGGCGACTACTCCTTCGGCGCCACCGCCTTCTTCCGTGACCTCTTCCTTCTCTTCACCAACTTCACCGCGTTCTTCCCCACCCACTCCGTCCACTCACGCGCCGCCGCCCAGCTCTGCAACCTCGTCTCCGACAAGATGAAGAACTTCACCCAACCCGGCCGCAATAACACCCCTCCTTCTGTACACCCACCTCCGCCGCAGCCCCCACCGTTATCCACACTCAAGCCTGATTCTTCTCATAATTTGCTTTCCAAGCACAAAGCTTCTGCTCCCATTCTTGTTTGCCGGAAACGCAGTTCCATGTCCGGTAAACCTTCCTCTGCCTCTACATTTGGCCATAATAATAATAAGGGTACTGACCGGTTAAGCAGCGAGAAGAAACCGCCGCCGCCGCAGAAGAGGCCACCGCCGGTTTCTGATGATTCAGATGAAGAACCTCCTTCTCCTCGTCCTGCTGCTGCTGCTCCTTCTCTGCCACCTAAGTCGAAGGAGAAGCCGGTGACCGGAGCAAGAAGCATGAGAAGAAGCAACAAAAACCTCGGTGGAGCCATCCAGAACAAGAAGCTTCAGTCCAGTAGTAAAACAAGCCCTCCCAAATCAGATCAAAAAACCAAAGCAGCAGCAGCCGTAGAAGCAGAAGAACAAGCAGCATCGACATCCGACAAAAAGAGAAGCGCGGCCGCAGATTTCTTGAAAAGGATAAAGAAAAACAGCCCCGGCGAGGCAATGAAGAGCGGCGGCGGCGGCGGAAGAGATCAGAAGAAGGTGATGGGTAGTGGCGGCGGAAAGGGCGGCGATCATCAGAAAGGGAGGGAGAGAACATTGAGAAATGGTGGCAAATCCGGGGAGAGGAATAAGGGTAGTGATCAGAATACAGAGAATATGAATAGTAATCAGTCAAAAAGAAGTGTTGGGAGGCCACCGAAGAAAGTAGCAGAGAGTAATAACACTAATAATAATAATGCCTCAAGTTCTGCTAAACGTGGAAGGGAAAGTGGTGGTAGTAATGGGAAGGATAAGAGGCCTAAGAAACGAAGTAGGAAGTAA 2199 0.5325 MEKQRNQNHYHHRNPDNKNHHHRHRQTWGTWEDLLLASAVKRHGSNNWDTVAMEIQNRTNLPHLLTTARNCEQKFLDLKRRFTAQCNDAVRYPPENGAPDVDVVDHVPWLDELRKLRVAELRREVQRHDVSILSLQHKVKRLEEEREKSLKENDAERDEKPDLENSGKPETDEKNGGGGGKPEPENSEPGRRVDDDGNDNSNDNNNNNNCSTNKLPEGDDSDRDNQSVNESNSTGSRSAGEKTGEEDVKPEPPPAHPGPKKPDPSADKKIEDSSELRDSVAHSEGGGTRESGEVQSSASLTRKRKSRKRKKVSGSGGNGEEEAPENDGVAAKSQPLVGLLELIKGHENSSLFERRLESQEEWEKYKSMVREHVDLEIIQTRLRNGDYSFGATAFFRDLFLLFTNFTAFFPTHSVHSRAAAQLCNLVSDKMKNFTQPGRNNTPPSVHPPPPQPPPLSTLKPDSSHNLLSKHKASAPILVCRKRSSMSGKPSSASTFGHNNNKGTDRLSSEKKPPPPQKRPPPVSDDSDEEPPSPRPAAAAPSLPPKSKEKPVTGARSMRRSNKNLGGAIQNKKLQSSSKTSPPKSDQKTKAAAAVEAEEQAASTSDKKRSAAADFLKRIKKNSPGEAMKSGGGGGRDQKKVMGSGGGKGGDHQKGRERTLRNGGKSGERNKGSDQNTENMNSNQSKRSVGRPPKKVAESNNTNNNNASSSAKRGRESGGSNGKDKRPKKRSRK 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g2103 732 MobiDBLite consensus disorder prediction 672 715 - -
Alju10g2103 732 SUPERFAMILY Bromodomain 332 435 IPR036427 GO:0005515
Alju10g2103 732 SMART sant 24 81 IPR001005 -
Alju10g2103 732 MobiDBLite consensus disorder prediction 143 199 - -
Alju10g2103 732 MobiDBLite consensus disorder prediction 649 671 - -
Alju10g2103 732 MobiDBLite consensus disorder prediction 200 215 - -
Alju10g2103 732 MobiDBLite consensus disorder prediction 431 732 - -
Alju10g2103 732 Pfam Myb-like DNA-binding domain 25 59 IPR001005 -
Alju10g2103 732 Gene3D - 325 435 IPR036427 GO:0005515
Alju10g2103 732 ProSiteProfiles Bromodomain profile. 344 416 IPR001487 GO:0005515
Alju10g2103 732 MobiDBLite consensus disorder prediction 143 331 - -
Alju10g2103 732 PANTHER DNA-BINDING BROMODOMAIN-CONTAINING PROTEIN 17 732 - -
Alju10g2103 732 Coils Coil 125 159 - -
Alju10g2103 732 MobiDBLite consensus disorder prediction 484 502 - -
Alju10g2103 732 MobiDBLite consensus disorder prediction 240 284 - -
Alju10g2103 732 CDD SANT 27 79 IPR001005 -
Alju10g2103 732 ProSiteProfiles Myb-like domain profile. 20 59 IPR001005 -
Alju10g2103 732 SUPERFAMILY Homeodomain-like 20 60 IPR009057 -
Alju10g2103 732 SMART bromo_6 135 435 IPR001487 GO:0005515
Alju10g2103 732 MobiDBLite consensus disorder prediction 441 457 - -
Alju10g2103 732 MobiDBLite consensus disorder prediction 556 586 - -
Alju10g2103 732 Pfam Bromodomain 339 419 IPR001487 GO:0005515
Alju10g2103 732 Gene3D - 18 77 - -
Alju10g2103 732 CDD Bromodomain 339 430 - -
Alju10g2103 732 MobiDBLite consensus disorder prediction 600 623 - -
Alju10g2103 732 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g2103 Alju-ChrAlju10 40496603 40501705 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Alju10g2103 Bromodomain 5.3e-09 No_clan