Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g2077 ATGGCGCTGAAAACTGCGAGGATCACCAGAAATCCTGAACTGATAAGGGGAATCAGAAAGTATTCGAGGTCGAAGATGTACCACAAGAGAGGTTTGTGGGCCATCAAGGCTAAAAATGGCGGCGTTTTCCCTCATCACGATGCCAAACCTAAGCCCGAAGCTCCTGCCGAGAAGCCTCCTAAATTCTATCCTGCCGACGACGTCAAAAAGCCCATCGTCAATAAGCACAAGCCGAAACCTACTAAACTTAGAGCCAGCATTACTCCGGGGACAGTATTGATACTTCTTGCTGGGAGATTCATGGGAAAGAGAGTAGTGTTTCTGAAGCAGCTTCCTTCTGGATTGCTTCTTGTTACCGGTCCATTCAAGATAAATGGAGTTCCTTTGAGGCGTGTAAGCCAGTCTTACGTGATTGGAACATCCACGAAGATAGATATCTCTAGAGTTAACTTGGAAAAGTACGACGACAAGTACTTCGCCAAAAAGGCCGAGAAGAAGCAGAAGAAGGGAGAGGGAGAGTTCTTTGAGGCAGAGAAGGAGGAAAAGAATGTGATCCCACAAGAGAAAAAAGATGACCAGAACGTAGTGGACGCAGCATTGATAAAGGCCATAGAGAGCATTCCAGACTTGAAGGCTTATTTGGGTTCAAGATTTTCGCTCAAGGCAGGCATGAAGCCTCATGAACTGGTCTTCTAA 696 0.4626 MALKTARITRNPELIRGIRKYSRSKMYHKRGLWAIKAKNGGVFPHHDAKPKPEAPAEKPPKFYPADDVKKPIVNKHKPKPTKLRASITPGTVLILLAGRFMGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVSQSYVIGTSTKIDISRVNLEKYDDKYFAKKAEKKQKKGEGEFFEAEKEEKNVIPQEKKDDQNVVDAALIKAIESIPDLKAYLGSRFSLKAGMKPHELVF 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g2077 231 CDD KOW_RPL6 79 231 IPR041997 -
Alju10g2077 231 Pfam Ribosomal protein L6e 124 231 IPR000915 GO:0003735|GO:0005840|GO:0006412
Alju10g2077 231 Pfam Ribosomal protein L6, N-terminal domain 9 59 IPR005568 GO:0003735|GO:0005840|GO:0006412
Alju10g2077 231 MobiDBLite consensus disorder prediction 44 76 - -
Alju10g2077 231 MobiDBLite consensus disorder prediction 44 74 - -
Alju10g2077 231 FunFam 60S ribosomal protein L6 85 169 - -
Alju10g2077 231 Gene3D - 85 170 IPR014722 -
Alju10g2077 231 PANTHER 60S RIBOSOMAL PROTEIN L6 3 231 IPR000915 GO:0003735|GO:0005840|GO:0006412
Alju10g2077 231 SUPERFAMILY Translation proteins SH3-like domain 85 175 IPR008991 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g2077 Alju-ChrAlju10 40219500 40221014 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g2077 4 231 Cytoplasmic Ribosomal Protein Gene Family AT1G74060 79.825 2.61e-119 337