Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g2072 ATGGCTCACTGGCAGAGTGATTTAGAAGAGGGGATCGACTACATGTTCAAGATTGTGATGATCGGAGACTCCGGCGTCGGGAAATCCCAGCTCCTGAATCGTTATGCCAGGAATGAGTTCAATGCGAAATCCAAGGCGACGATCGGAGTTGAATTTCAGACCAAGACGGTGCTCATGGATCACAAGGTTGTCAGGGCTCAGATTTGGGATACTGCTGGTCAAGAAAGATACCAGGCGATTACTACTGCATATTACAGAGGTGCAATTGGTGCATTACTGGTATATGACATAACCAGGCAAGATACCTTTGATCATGTTGAAACATGGTTGGAGGAGCTACAAATGCATGCAGATAAGAATGTTACTGTCATGCTTGTTGGCAACAAGTGTGACCTTGGTTCGATGCGAGTGGTACCTGTTGAGGTAGCCAAAGAGCTTGCTCAGAAGCAAAATCTCTTCTTCATGGAGACATCGGCACTTGACTCCACCAACGTGGAGCAAGCTTTCCTTGGTCTTCTCTCTCAGATCTATTTAACCGTCCGTAAGAAGTCTCTAGTGGCTAATGGAGCAGAATCAAAACTGGAGAAGGTAAATCTTGAAGGGACAGAAATTTGTGTCCCTTCAGATGACATAGAGTATCGAAAGGGCCCAGAAACTAAAAAGAGGAGATTGTTGGTGGAGACATCTTTTCCACCAAAGGTTCAAATTCTCTTGGTTGGATTGGCTGGCATGCAAGAAAACTCAACTTCTGATGGCTTGATGAAATTGAGTAGTCGATTCACTGAGCTTTTTGCCCATTATTATTTGATTAGAGCTGCTTCTTGA 825 0.4448 MAHWQSDLEEGIDYMFKIVMIGDSGVGKSQLLNRYARNEFNAKSKATIGVEFQTKTVLMDHKVVRAQIWDTAGQERYQAITTAYYRGAIGALLVYDITRQDTFDHVETWLEELQMHADKNVTVMLVGNKCDLGSMRVVPVEVAKELAQKQNLFFMETSALDSTNVEQAFLGLLSQIYLTVRKKSLVANGAESKLEKVNLEGTEICVPSDDIEYRKGPETKKRRLLVETSFPPKVQILLVGLAGMQENSTSDGLMKLSSRFTELFAHYYLIRAAS 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g2072 274 NCBIfam small GTP-binding protein domain 14 169 IPR005225 GO:0005525
Alju10g2072 274 ProSiteProfiles small GTPase Rho family profile. 9 187 - -
Alju10g2072 274 FunFam ras-related protein RABA5a 8 222 - -
Alju10g2072 274 Pfam Ras family 17 176 IPR001806 GO:0003924|GO:0005525
Alju10g2072 274 CDD Rab11_like 13 177 - -
Alju10g2072 274 Gene3D - 9 205 IPR027417 -
Alju10g2072 274 ProSiteProfiles small GTPase Rab1 family profile. 11 212 - -
Alju10g2072 274 PANTHER DRAB11-RELATED 12 188 - -
Alju10g2072 274 SMART rho_sub_3 18 175 IPR001806 GO:0003924|GO:0005525
Alju10g2072 274 SMART rab_sub_5 16 179 - -
Alju10g2072 274 SMART ran_sub_2 21 224 - -
Alju10g2072 274 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 13 184 IPR027417 -
Alju10g2072 274 PRINTS Transforming protein P21 ras signature 57 79 - -
Alju10g2072 274 PRINTS Transforming protein P21 ras signature 119 132 - -
Alju10g2072 274 PRINTS Transforming protein P21 ras signature 39 55 - -
Alju10g2072 274 PRINTS Transforming protein P21 ras signature 154 176 - -
Alju10g2072 274 PRINTS Transforming protein P21 ras signature 16 37 - -
Alju10g2072 274 SMART ras_sub_4 16 179 - -
Alju10g2072 274 ProSiteProfiles small GTPase Ras family profile. 6 238 IPR001806 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g2072 Alju-ChrAlju10 40195389 40197777 Wgd