Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g2041 ATGCATTGTATGAGCCGTAGTTATGGAGTTTGTCCTTTTGCCTGTCAATTGATATTTCGAGAGAAGCGCGTAGTGCTGCCGCAAGATGTGATTGTTAAAGCTGCCTCGCACTGCACTCTGTTGAATTCGAAAGAGCTTGACCGTTTTTTTTGGAAGTATTGTTTCAGTACTATCGATAATAGGCCAATGGAGGTGCATTACATAGATACGGGCTTTCCTTATACTGTTACAGAAAGCTTCATGGACTTCTTTGAAGGCATCACGTATGCGCCAGCGAATTGTCTCCACACCGGATCTGTGCCTGATCAGGAAAGTGCCAACTGGATGATGAATATGAGCCCATATAAATATGACATGTCTGTCCCTTTGTGTCCATCTTATTTTGGTTATCCTGAATATATCCTTCCCCTACCAAGGATGGAGGTCAACAGGGGACAGTGGGAAAGCCCTTCACCAATGACCATTGAGGAGCCTGCAACAACAGACTCTTTGTCCAGAAGAGATGGAGTCGCTGGCATGCAGACCATTCCTGAAGAATGCAGCCCTAATCATCAAGATTCCCCTGGTACTCAGGTTGTATGGCAGCAAGACAGCATTGATCCCGATAATATGACTTATGAGGAATTACTGGACTTGGGTGAGGTGGTTGGAACTCAAAGCAGAGGCCTTTCTAAAGAACTTATTGATTCACTTCCTGTCTCAAAGTACAATTTTAAAAGCATGTTTAAAAGAAAAAAATATGGGAAAAGGTGTGTAATCTGTCAGATGACATACAAAAGGGGTGACCAACAAATGAAATTGCCATGCACGCATGTTTACCATAGTGAGTGCATCTCCAAATGGCTTAGCATTAACAAGAAGTGCCCAGTTTGCAACACTGAGGTGTTTGGCGAGGATTCAAGGAATTAG 909 0.4334 MHCMSRSYGVCPFACQLIFREKRVVLPQDVIVKAASHCTLLNSKELDRFFWKYCFSTIDNRPMEVHYIDTGFPYTVTESFMDFFEGITYAPANCLHTGSVPDQESANWMMNMSPYKYDMSVPLCPSYFGYPEYILPLPRMEVNRGQWESPSPMTIEEPATTDSLSRRDGVAGMQTIPEECSPNHQDSPGTQVVWQQDSIDPDNMTYEELLDLGEVVGTQSRGLSKELIDSLPVSKYNFKSMFKRKKYGKRCVICQMTYKRGDQQMKLPCTHVYHSECISKWLSINKKCPVCNTEVFGEDSRN 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g2041 302 SMART ring_2 251 291 IPR001841 -
Alju10g2041 302 SUPERFAMILY RING/U-box 250 296 - -
Alju10g2041 302 FunFam E3 ubiquitin ligase BIG BROTHER 213 296 - -
Alju10g2041 302 Pfam Ring finger domain 250 292 IPR001841 -
Alju10g2041 302 ProSiteProfiles Zinc finger RING-type profile. 251 292 IPR001841 -
Alju10g2041 302 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 61 298 IPR033276 GO:0004842|GO:0016567|GO:0046621
Alju10g2041 302 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 214 296 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g2041 Alju-ChrAlju10 39809255 39814633 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g2041 59 300 C3H Transcription Factor Family AT3G63530 51.230 6.88e-83 248