Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g2036 ATGGGGAAGGAGAAAATGAAAATGAAGAACAACAACAGTAATAATAAGAGCAAGATGAGGAAAGGGCTGTGGTCGCCGGAGGAAGATGAGAAATTGTTAAGGTACATGCTGACGAATGGACAAGGTTGTTGGAGTGACATTGCCAGAAACGCCGGCCTCCTTCGCTGCGGCAAAAGTTGTCGCCTTCGTTGGATCAATTACCTCAGACCTGACCTCAAACGTGGTGCTTTTTCCCCTCATGAGGAACACCTCATCATTCACCTTCACTCTCTTCTTGGCAACAGATGGTCTCAAATTGCTGCACGTCTTCCTGGGAGAACAGACAATGAGATTAAGAATTTCTGGAACTCAACATTGAAGAAAAGGTTCAAAAATAACAACACTTCATCATCTTCATCACCAAACAACTCATCATCTTCTACATCCTCATCATCAGAACCTAAAAATCATGTCTTGATCAATGGAAACTCAAGCATGATCGACCCATTAATGCCCACGTCATCATCGACCTCCTTGTCGTCGTCCATGCAAGTCCCGATCATTTTCGGAGATCAATTAGTTTCCGGCGATACCTTTTTCACATTGAATCATCATCATCATCATCACAATATTGAAGGACCTGGTAATTTTCCTTTATTACCTGCAACAGATCAAGTTGGGAATATAGAAGAAGAAGGGCTTTATACTAATAATGGAGATTATGGGACAATATTACTAGAGCCAGCTGGTTGTAACAACATGGAAAGTGGTGGTAGAGGCAATTATAATATTAGTGTCCCAAATTTTGATGATGATCTTATTAGTGTGAAAAGCCACTACAACAACAACTTTAATAATAGTTGCTTCAATTTCACTAATGATCATCATCATCATCAAATAATTCAGAGCTCTATAAGTAAAGGAGAGGAATCAGAGGGCATGTTTGGGTTTGGAAATAGCAAGATCATCAATAATAATATTAATGAGCACTTTGGAGAAAACCTAATGGTGGGAGATCAATGGGATTTAGAAGGTCTGATGCAAGATATGTCTTCTTTTCCCTTCCATGATTTTTCCAATTTAGTCGAATAA 1071 0.394 MGKEKMKMKNNNSNNKSKMRKGLWSPEEDEKLLRYMLTNGQGCWSDIARNAGLLRCGKSCRLRWINYLRPDLKRGAFSPHEEHLIIHLHSLLGNRWSQIAARLPGRTDNEIKNFWNSTLKKRFKNNNTSSSSSPNNSSSSTSSSSEPKNHVLINGNSSMIDPLMPTSSSTSLSSSMQVPIIFGDQLVSGDTFFTLNHHHHHHNIEGPGNFPLLPATDQVGNIEEEGLYTNNGDYGTILLEPAGCNNMESGGRGNYNISVPNFDDDLISVKSHYNNNFNNSCFNFTNDHHHHQIIQSSISKGEESEGMFGFGNSKIINNNINEHFGENLMVGDQWDLEGLMQDMSSFPFHDFSNLVE 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g2036 356 MobiDBLite consensus disorder prediction 125 168 - -
Alju10g2036 356 Gene3D - 19 74 - -
Alju10g2036 356 ProSiteProfiles Myb-like domain profile. 16 68 IPR001005 -
Alju10g2036 356 FunFam MYB transcription factor 18 74 - -
Alju10g2036 356 FunFam Transcription factor MYB46 75 149 - -
Alju10g2036 356 CDD SANT 76 119 IPR001005 -
Alju10g2036 356 Gene3D - 75 150 - -
Alju10g2036 356 SUPERFAMILY Homeodomain-like 19 115 IPR009057 -
Alju10g2036 356 SMART sant 73 121 IPR001005 -
Alju10g2036 356 SMART sant 20 70 IPR001005 -
Alju10g2036 356 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 16 68 IPR017930 -
Alju10g2036 356 CDD SANT 24 68 IPR001005 -
Alju10g2036 356 PANTHER MYB DOMAIN PROTEIN 55 11 304 - -
Alju10g2036 356 MobiDBLite consensus disorder prediction 1 23 - -
Alju10g2036 356 Pfam Myb-like DNA-binding domain 21 68 IPR001005 -
Alju10g2036 356 Pfam Myb-like DNA-binding domain 74 118 IPR001005 -
Alju10g2036 356 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 69 123 IPR017930 -
Alju10g2036 356 ProSiteProfiles Myb-like domain profile. 69 119 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g2036 Alju-ChrAlju10 39715067 39717825 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g2036 14 351 MYB Transcription Factor Family AT3G08500 47.688 2.18e-80 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Alju10g2036 Myb_DNA-binding 8.8e-13 CL0123