Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Alju10g2031 | ATGAAAAAGCTAACTGTTCATACAGAAGATTCTTTTTCCAGCCTACTGGAACTTGCTGCTAACAATGATGTTGAAGGTTTTAAGCTACTGCTAGATAGGGATGTTTCTTCAATAAATGAAGTTGGGCTTTGGTATTGTCGCCAGATTGGGTCAAAACAAATTATTCTCGACGATAGAACTCCATTAATGGTTGGTGCAACCTATGGCAGTATTGATGTTGTTAAGCTTCTACTCTCTTATCCAGAGGCCAATGTTGATTTCACATGTGGGATAAGCAAGAGTACTGCCCTTCACTGTGCTGCTTCAGGCGGATCAAATAATGCGGTTGAAGTTGTGAAGCTTCTTTTAGAAGCTGGTGCTGATCTTAGTTGCAAGGATGCTAGTGGAAATCGTCCTGTTGATGTTATTGTTGTTCATCCGAAGCTGCTAGTCATGAGAGCAATTCTGGAGGAACTTCTTTCTGATAGTGCGTCTCATGACAACTCTGGTGACTGCTCTATTCCAGTACCTGTTAATCCATCAAGTCCTGGTTTACCTGCCCATTTATTTTCTCCCGATAATGGATTGCCATCCTCTCCTTCGGGCTCACCTTCTTCTCCAATGGCCTCAAAGTTTGCTGATACCCCTGTTATCTCTACCTCGGAGAAGAAAGAGTATCCAATTGATCCATCACTTCCTGATATAAAAAACAGCATTTATGCAACGGATGAGTTTCGCATGTTCTCATTCAAGGTTCGTCCTTGCTCCCGTGCATACTCTCATGATTGGACTGAGTGTCCTTTCGTTCATCCAGGAGAGAATGCTCGTAGGAGAGACCCCAGAAAATTCCATTACAGTTGTGTACCATGCCCTGATTTTCAGAAGGGTGCGTGTAGGCGAGGGGATATGTGTGAATATGCACATGGAGTATTTGAATGCTGGCTACACCCTGCTCAGTATCGCACTCGACTCTGCAAAGATGGCACAAATTGCAACAGAAGGGTGTGTTTTTTTGCTCACACAGCAGAAGAGTTGCGTCCGCTTTATGTGTCCACCGGATCTGCTGTCCCTTCTCCAAGAGCATCTGCGTCTGCTCCCAATGTCATGGATATGGCTGCTGCAATGAACCTGTTACCTGGTTCTCTTTCGTCAGTGTCTTCTATGTCTCCATCTCACTTTACGCAGCCGATGTCTCCATCTGGTAATGGCATTTCACACTCATCTGCAGCCTGGCCACAGCCCAATGTGCCAGCCCTTCATCTTCCGGGAAGTAATCTCCAATCTAGTCGTTTGAGATCTTCTCTTAGTGCTCGTGATATTCCACCACACGACTTGAACATGTTGCCAGAATTTGATGGCCAGCAACACCTTTTGAATGATATGGGCTGTTTCTCACAGCCTCGTTCTGGTGCTGTTTCTTTGAGCCGATCTGGTCGGTCCAAGACGCTAACTCCATCTAATCTTGAAGAGCTATTTTCTAATGAAATTTCTTCGTCTCCTCGGTATTCTGATCCAGCAGCAGGTTCTGTTTTTTCTCCCACACACAAATCTGCTGTTCTCAATCAGTTTCAACAGCTTCAAAGTATGCTGTCACCCATAAATACAAATGTTTTGTCTCCTAAGAATGCTGAGCATCCTCTATTGCAAGCTCCATTCGGAGTGTCTTCTCCTGGAAGGATGTCACCCAGAAGTGTGGATCCAATATCTCCCATGAGCTCTCGGTTATCTCCATTTGCTCAGCGTGAGAAGCAGCAGCAGCAACAGCTGCGAAATCTTAGTTCAAGGGATCTTGGTTCCAAAATTCCTGCTTCAGTTGTTGGTTCTCCTGGAAACTCATGGTCTAATTGGGGATCTCCTACTGGGAAAGTTGATTGGTCAATGAATGGAGATGAATTGGGTCGATTGCGAAAGTTGTCTTCATTTGAGCATGGGAACAATGGGGAAGAGCCTGATCTATCTTGGGTTCAGTCCCTTGTCAAGGAATCCCCACCTGAAATGATGAAAGAGAAGCTGGCTGCTTCTGGTCCCATGGCATCTGGGGAAAAACTGAATTCAATATCTCAAGTTGAATCAATTGATAATTCTGTGGTAGGAGCTTGGCTTGAGCAAATGCAGCTGGATCAGCTTGCTGTCTAG | 2115 | 0.4501 | MKKLTVHTEDSFSSLLELAANNDVEGFKLLLDRDVSSINEVGLWYCRQIGSKQIILDDRTPLMVGATYGSIDVVKLLLSYPEANVDFTCGISKSTALHCAASGGSNNAVEVVKLLLEAGADLSCKDASGNRPVDVIVVHPKLLVMRAILEELLSDSASHDNSGDCSIPVPVNPSSPGLPAHLFSPDNGLPSSPSGSPSSPMASKFADTPVISTSEKKEYPIDPSLPDIKNSIYATDEFRMFSFKVRPCSRAYSHDWTECPFVHPGENARRRDPRKFHYSCVPCPDFQKGACRRGDMCEYAHGVFECWLHPAQYRTRLCKDGTNCNRRVCFFAHTAEELRPLYVSTGSAVPSPRASASAPNVMDMAAAMNLLPGSLSSVSSMSPSHFTQPMSPSGNGISHSSAAWPQPNVPALHLPGSNLQSSRLRSSLSARDIPPHDLNMLPEFDGQQHLLNDMGCFSQPRSGAVSLSRSGRSKTLTPSNLEELFSNEISSSPRYSDPAAGSVFSPTHKSAVLNQFQQLQSMLSPINTNVLSPKNAEHPLLQAPFGVSSPGRMSPRSVDPISPMSSRLSPFAQREKQQQQQLRNLSSRDLGSKIPASVVGSPGNSWSNWGSPTGKVDWSMNGDELGRLRKLSSFEHGNNGEEPDLSWVQSLVKESPPEMMKEKLAASGPMASGEKLNSISQVESIDNSVVGAWLEQMQLDQLAV | 704 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Alju10g2031 | 704 | ProSiteProfiles | Zinc finger C3H1-type profile. | 282 | 304 | IPR000571 | GO:0046872 | |
Alju10g2031 | 704 | FunFam | Zinc finger CCCH domain-containing protein 66 | 235 | 303 | - | - | |
Alju10g2031 | 704 | SUPERFAMILY | Ankyrin repeat | 6 | 150 | IPR036770 | - | |
Alju10g2031 | 704 | SMART | ANK_2a | 57 | 87 | IPR002110 | GO:0005515 | |
Alju10g2031 | 704 | SMART | ANK_2a | 10 | 40 | IPR002110 | GO:0005515 | |
Alju10g2031 | 704 | SMART | ANK_2a | 92 | 124 | IPR002110 | GO:0005515 | |
Alju10g2031 | 704 | MobiDBLite | consensus disorder prediction | 382 | 420 | - | - | |
Alju10g2031 | 704 | SMART | c3hfinal6 | 312 | 335 | IPR000571 | GO:0046872 | |
Alju10g2031 | 704 | SMART | c3hfinal6 | 277 | 303 | IPR000571 | GO:0046872 | |
Alju10g2031 | 704 | MobiDBLite | consensus disorder prediction | 382 | 405 | - | - | |
Alju10g2031 | 704 | Gene3D | - | 277 | 340 | - | - | |
Alju10g2031 | 704 | PANTHER | UNKEMPT FAMILY MEMBER | 17 | 655 | IPR045234 | - | |
Alju10g2031 | 704 | MobiDBLite | consensus disorder prediction | 545 | 610 | - | - | |
Alju10g2031 | 704 | ProSiteProfiles | Ankyrin repeat profile. | 92 | 127 | IPR002110 | GO:0005515 | |
Alju10g2031 | 704 | Gene3D | - | 2 | 168 | IPR036770 | - | |
Alju10g2031 | 704 | MobiDBLite | consensus disorder prediction | 187 | 205 | - | - | |
Alju10g2031 | 704 | Pfam | Ankyrin repeats (3 copies) | 18 | 126 | IPR002110 | GO:0005515 | |
Alju10g2031 | 704 | ProSiteProfiles | Ankyrin repeat region circular profile. | 92 | 126 | - | - | |
Alju10g2031 | 704 | MobiDBLite | consensus disorder prediction | 176 | 205 | - | - | |
Alju10g2031 | 704 | MobiDBLite | consensus disorder prediction | 559 | 591 | - | - | |
Alju10g2031 | 704 | Pfam | CCCH-type zinc finger | 282 | 302 | IPR041367 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Alju10g2031 | Alju-ChrAlju10 | 39526647 | 39528761 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Alju10g2031 | 9 | 701 | C2H2 Transcription Factor Family | AT5G12850 | 55.728 | 0.0 | 703 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C3H | Alju10g2031 | Ank_2 | 5.8e-11 | CL0465 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Alju10g2031 | 10 | 39526647 | 39528761 | Alju10g2031 | 10 | 39526647 | 39528761 | ECH |