Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g2030 ATGGCATTGTGTGGCCGATTCAGATCAGGCATCTCTCTCGCCAACAAATTGGCGTATCTTAGTTCTGATTCTGTCTCTGCTCAGAGATCCACACTTCACCGATCCCTGATTGCCCCCTTCACTTCTCTGGACTCTAAGAATTATGCCACTGCATCAGAGAAAAGGGAGGAAAAAGTAAAGGTGCCACTGGCCTTGTTTGGAGGTGCAGGAAATTATGCCTCTGCTTTGTATATTGCTGCAGTGAAAGCTAATGCACTGGAAAAGGTTGAGTCTGAGGTTCTTGACCTTGTTGAGGCAATAAAGAATAGTCCTAAATTTGCACAGTTTACGAAGGACTTGTCTGTGCCTAAAGATACCAGAATTAAGGCCATCCAGGAAATTTCTAAGGAAGCTAAATTTTCAGATATTACGACAAACTTCCTTGTTATCGTGGCTGAGAATGGGAGGCTGAGAAACTTAGATAGCATAGCAAAGAAGTTTAAGGACCTGACAATGGCACATAAGGGAGAAGTGAAAGCTATTGTGACCACTGTTATTCCACTTCCCCCTCACGAAGAGAAGCAACTGAAAGAGATCCTTCAGGAGATCATAGGTGCAGGGAAGAAGGTTCTTATTGAAGAGAAGATTGATCCCAGCATCCTTGGTGGTTTAGTGGTAGAATTTAACCAGAAGGTCCTAGATGCTTCGATTAAGACTAGGGCTAACCAGATGGAGCGGTTCCTCCGAGAGCCCTTAACTCTCGGCGCCATCTAG 753 0.4462 MALCGRFRSGISLANKLAYLSSDSVSAQRSTLHRSLIAPFTSLDSKNYATASEKREEKVKVPLALFGGAGNYASALYIAAVKANALEKVESEVLDLVEAIKNSPKFAQFTKDLSVPKDTRIKAIQEISKEAKFSDITTNFLVIVAENGRLRNLDSIAKKFKDLTMAHKGEVKAIVTTVIPLPPHEEKQLKEILQEIIGAGKKVLIEEKIDPSILGGLVVEFNQKVLDASIKTRANQMERFLREPLTLGAI 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g2030 250 PANTHER ATP SYNTHASE DELTA CHAIN 44 243 IPR000711 GO:0015986|GO:0046933
Alju10g2030 250 ProSitePatterns ATP synthase delta (OSCP) subunit signature. 203 222 IPR020781 GO:0015986|GO:0016020|GO:0046933
Alju10g2030 250 Hamap ATP synthase subunit delta [atpD]. 64 243 IPR000711 GO:0015986|GO:0046933
Alju10g2030 250 Gene3D - 67 161 IPR026015 -
Alju10g2030 250 SUPERFAMILY N-terminal domain of the delta subunit of the F1F0-ATP synthase 67 170 IPR026015 -
Alju10g2030 250 PRINTS ATP synthase delta subunit signature 68 87 IPR000711 GO:0015986|GO:0046933
Alju10g2030 250 PRINTS ATP synthase delta subunit signature 149 163 IPR000711 GO:0015986|GO:0046933
Alju10g2030 250 PRINTS ATP synthase delta subunit signature 216 234 IPR000711 GO:0015986|GO:0046933
Alju10g2030 250 PRINTS ATP synthase delta subunit signature 138 149 IPR000711 GO:0015986|GO:0046933
Alju10g2030 250 PRINTS ATP synthase delta subunit signature 201 216 IPR000711 GO:0015986|GO:0046933
Alju10g2030 250 Pfam ATP synthase delta (OSCP) subunit 69 239 IPR000711 GO:0015986|GO:0046933
Alju10g2030 250 NCBIfam ATP synthase F1 subunit delta 70 240 IPR000711 GO:0015986|GO:0046933
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g2030 Alju-ChrAlju10 39497885 39508828 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g2030 3 245 Primary Pumps ATPases AT5G13450 48.148 1.13e-65 201