Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g2011 ATGGAGGAAGTTCAGGAGCCTCAAACTCAACCACTGGGTGGAGAAGATCAAGATGAAATAATTACTGAAAGTTCTGCATTTGTTAAAGGGGAAACTCCACAAGATGTGAGTAATCCTCCTAAAGTTGACTCAGAGGTTGAAGTACTCCACGAGAATGTTACAAAACAAATAATTAAGGAAGGTCATGGTCAGAAGCCTACCAAATATTCAACATGCTTTTTTCATTACAGGGCATGGACTGAAAGCACACAGCACAAGTTTGAAGACACATGGGATGAGCAACGACTCATTGAAATGATATTAGGAAAAGAGAAGAAAGAAATGACTGGCTTGGCTATTGGTGTGACCAGCATGAAAGCTGGAGAGCGTGCCTTACTGCGTGTGGGTTGGGAATTAGGATATGGGAAGGAAGGCAACTTCTCTTTTCCAAATGTTCCACCTATGGCAGATTTAGTTTATGAAGTTGAGCTCATAGGCTTTGATGAAACAAAAGAAGGAAAACCTCGCAGTGATATGACTGTTGAGGAAAGGATCGGTGCGGCAGACCGTAGAAAGATGGATGGAAATGCTTTATTTAAAGAGGAGAAATTGGAGGAGGCTATGCAACAGTATGAAATGGCCATAGCATATATGGGAGATGACTTCATGTTCCAGTTGTTTGGGAAGTATAGGGATATGGCTTTGGCTGTAAAGAATCCTTGCCACCTTAACATGGCTGCATGTTTGATTAAGCAGAACCGTTATGATGAAGCCATAGGACAATGTAGCCTTGTGTTGAGTGAGGATGAAAACAATGTGAAGGCGTTATTTAGACGAGGCAAGGCTAGGGCAGCACTAGGTCAAACGGATGCTGCCAGGGAGGATTTTCTGAAAGCAAAGAAGTATGCCCCAGAAGATAAAGCAATAGCAAAAGAATTGCGATTGCTTGCCGAACACGACAAGGCTCTTTATCAAAAGCAAAAAGAGATATATAAAGGAATGTTTGGACCGAGGCCTGAACCAAAACCCCAGCAAAGGAATTTTCTGATTCTTATTTGGCAGTGGTTGGTGGCGGTATTTCATCGCCTCATTATGCTCTTCAAGCGTGAAAGGCAAAAATCTGACTAA 1107 0.4228 MEEVQEPQTQPLGGEDQDEIITESSAFVKGETPQDVSNPPKVDSEVEVLHENVTKQIIKEGHGQKPTKYSTCFFHYRAWTESTQHKFEDTWDEQRLIEMILGKEKKEMTGLAIGVTSMKAGERALLRVGWELGYGKEGNFSFPNVPPMADLVYEVELIGFDETKEGKPRSDMTVEERIGAADRRKMDGNALFKEEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLIKQNRYDEAIGQCSLVLSEDENNVKALFRRGKARAALGQTDAAREDFLKAKKYAPEDKAIAKELRLLAEHDKALYQKQKEIYKGMFGPRPEPKPQQRNFLILIWQWLVAVFHRLIMLFKRERQKSD 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g2011 368 MobiDBLite consensus disorder prediction 1 42 - -
Alju10g2011 368 Pfam Tetratricopeptide repeat 267 299 IPR019734 GO:0005515
Alju10g2011 368 Gene3D - 37 162 IPR046357 GO:0003755
Alju10g2011 368 SUPERFAMILY FKBP-like 38 160 - -
Alju10g2011 368 PANTHER ARYL HYDROCARBON RECEPTOR INTERACTING PROTEIN RELATED 98 338 IPR039663 -
Alju10g2011 368 FunFam Peptidylprolyl isomerase 166 294 - -
Alju10g2011 368 Gene3D Tetratricopeptide repeat domain 163 294 IPR011990 GO:0005515
Alju10g2011 368 ProSiteProfiles TPR repeat profile. 266 299 IPR019734 GO:0005515
Alju10g2011 368 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 65 158 IPR001179 GO:0003755
Alju10g2011 368 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 69 161 IPR001179 GO:0003755
Alju10g2011 368 SMART tpr_5 181 214 IPR019734 GO:0005515
Alju10g2011 368 SMART tpr_5 266 299 IPR019734 GO:0005515
Alju10g2011 368 SMART tpr_5 232 265 IPR019734 GO:0005515
Alju10g2011 368 SUPERFAMILY TPR-like 173 326 IPR011990 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g2011 46 334 Calmodulin-binding Proteins AT5G48570 32.899 1.36e-30 120
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju10g2011 10 39267900 39271941 Alju10g2011 10 39267900 39271941 ECH