Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g2008 ATGAAGAGGTTGCGGTCTAGTGAGGATCTCCATTCGTACGGAGACAAGAATGGCTGCAAGGATTCGAATCTGAACCGATCCTCGTCTTCTTCACACCGAACCTTTTACTACAAACCTGATAATGTGCGGAAGGGATTGCTTTCCTCATCGTCTTCGGCGTCTCGGTATGACAGGGATCGAACGATGGATGAGGATCGGGAAGGCTCCCGCTTGGTTCGTAAGCGATCAGACCATGATTTTGATAGTTTTGATCGCAGAAAGGGGTTTGATCGTTACAGGGACACTGGAGATAATAGAGGATACGGAGCTGGAGGGGATAGGGGTTTGATGCAGAGGTCGGAGAGTTTTTGTGGATCTAGGAGGGATTTTCCGAAGGGCTTTCGGTCTGAGAGGGACCGGTCTCGGCGGGAAGGTAGTGTGTCTTCGTGGCGGAGATTTGGTGGTGGGTTAAAGGATTTTGATGATAGTGGCAGGGGTAGCAGGGTTGGACTGGAAGATAGAGTAGTGCGGTCTCCGAAGACTTTGAGGGATGTAAAATCCCCGACATGGTCAAAAGATTCAGAGAGTGAGCATTCCAAGATGAGTGGGCAGTCTAGGATGAGGTCTTCTTCGAGAGGGTCAAGAGATGCAAAGTCGAAGTCAAAGTCTCCATCTTGGTCGAAGGATTCAGAGAGTGAACAATCAAAGAGTGAGCAATCGAAGAGTGTTGAGGTGAAGAAAACTGAGGAATTACAGGTTGAGAGCCGTAGTAGTAGTGAAATGGAAGAAGGAGAACTGGAGCCAGAACCCATGCCTGAAACAGAACCAGAAAAAGTTTCTGATGCTGCACCTAAGAATGAAGACCAGGCCTCTATTCCTTTGGACGCTGATGGGAAGGAAATCCAGACTGAAAGCCAGCTCAATGATACAGATACTACCACGCATGAAATAAGGGAAGCGTTAAATAAAGAAGAGGGAAAACCAGAAGAGGTTGCAAATTCAGCAGAACAGATAGTGGAGCAAGATGAGAAGCTGCCAGAAGTTCAGAATGATCCAACTGATAAAGCGCATGATACCAAAAATAAAATTGAAACTTCTGTTCATAATGATAACAAGGCAGAAGAGAGTTCAAAAGTGGAAACCACATGTAAGGGGGAAACAAAGGAAGGTGCGGAGCATGAGAAGCCACTGATTCATGAAGAACATAAGCAGGACAACGGGGTAGAGATTGAAACCAGGGCAGAGCTACATAAGGAAGTTTCAACAGAAAATAAAGTGCTTAAAACAGATGTGGAGACTGTGACCAACGTCGTGAAGGATAAAGGCAAAAGTGTTTCTGTTACCGCTACTGATGTTGTTCATCCTTCTGAAGATGGTTTGTGGAATGACAGAGGGCCCAGAGATCTCACAGCATACTCGGGTGATGCCATGGAAGGTCCAAGCACAAGGGGCTTTGAGTTGTTTTCCAGATCTCCTGTCCGGAAAGCAGAGAAAACCGACCAATCAAGTCTCAGCAAACATAAAGATGGAAGTCTTTCAATGGAGGAGCTTGATCTTTCCCTTAGCTTGCCTAATGTTTTATTACCTATTGGTGCTCATGAGACTACACCAGCCCCTGGATCCCCCAGTCAAGCTAGAAGTGTCCAGTCTTTAAGTACATTTCATACCAACTCGGAAGGATTTACTGCGTCAATGTCTTTCTCAGGTTCTCAATCTTTTTATCACAATCCAAGCTGTTCTCTCACACAAAATTCAATCGATTATGAACAATCTGTTCATAGTCGCCCATTATTTCAGGGAATAGATCAAGCTTCTCATGGAGGCTGGCAAGTTATGTCTCAGACTGATCCCAAACAGAAAGAAATTCCTTACTGTCAAGGAACTTTGATTAATGGCAGTGGCAGCTTTTCTCAGTCTCAAGCAACATGGGGCATATTGGATGGTCAAGCTGTGAAAGGTCAGCCTTCTAGGGTTCTAGAAGGTAGCTCAAAAATGGCCAGTGGACTTGACAGGCAATTGAGTTTTCCCAAGCAACTGTCAGGACAGTCTAGGCGCAATGATGATGTTAGATCTCCTTCTCAGAGTGTTGGTTCTCATGACATTGGATCAAATTATAGTTTTGACAAGAAAAGAGAAAAGAGAGACAGGAGTAATGGTAGTTTATACAGGAGTGCAAGCCAGAAGGAACAAGAACAATTTCAGATGGGTGGAATTGAGTTTGTTGAGACAATCATTGCAAAAATAGTTTCTGAACCAGTGCCTGCTATGGCTAAAAAGTTTCATGAAATGAATGGACAGACTTTATCATGTTTGAAAGAGAGCATTCGTGAGATTATGCTCAATGCAGATAAGCGTGGGCAAATACTTGCTTTTCAGAAAGTTCTACAGAACAGGTCTGATATAACCCTGGAGGTTTTGCTGAAGGCCCACCGAGTTCAATTGGAAATTTTGGTTGCTTTGAGAACGGGTTTAACTAATTTTATTCAGTTAGACAACAGCATTTCCTCTGCTGATTTAGCTGAGATTTTTCTGAACTTAAGGTGTAGGAATGTCTTATGCCGAAGTCAGTTGCCTGTGGATGAGTGTGATTGCAAAGTTTGTGCGCAGAAAAATGGCTTTTGCAGGGAATGTATGTGTCTTGTGTGTTCTAAGTTTGACAATGCATCAAATACTTGTAGTTGGGTTGGATGCGATGTTTGCCTTCATTGGTGCCATGCGGAATGTGGATTACGTGAATCATATATTAGAAATGGACACAGTACTACTGGGGTACAAGGGGTATCTGAGATGCAATTTCATTGTATTGCCTGTGATCATCCTTCAGAGATGTTTGGTTTTGTCAAGGAAGTGTTTCTAAATTTTGCAAAAGATTGGTCGGTGGAAGCTCTTTGCAAGGAGCTTGAATATGTGAAGAGAATATTTTCTGCCAGCAAAGACATGAGAGGGAGACAGCTGCATGGGGTGGCTGATCAAATGCTGCTTAGGTTGGCAAATAAGTCTAACCTTCAAGAGGTTTATAGCCAAATCATGTCTTTCCTAAATGATGGAGATTCTTCCAAATTAGCCTTGACACGGAACTTTTCTGGGAAGGAGCAAATTAAAGAAAAGAATGCAGTTGCCGAGCCCAGTCAGGAGGCTGCCTGGATGAAATCAATCTATTCCGAAAAGAAGCCTCTGTTAGAACGGCCAGCAAACATCCTTTTGAGCTATGACCGGAATGATAAACGGGCTCCGCCACAAGAGTTGCAGATGAATGTCCAAAAGGACTATTGTTTTGATGAATTGGAGAGCATAATAAAAATTAAACTGGCAGAGGCTAAGATGTTTCAAACACGTGCGGATGATGCCAGAAGAGAAGCTGAAGGCCTGAAACGCATTGCCCTCGCAAAGAATGAGAAGATTGAAGAAGAGTATGCCAGCCGACTCTCAAAGTTGCGACTGGCAGAGACTGAGGAAATGCGTAAACAAAAATTTGAAGAGCACCAGGCGTTGGAAAGAGCGCATCTGGAGTACTTCAACATGAAAATGAGGATGGAAGCAGACATTAAGGATCTGCTCTTGAAAATGGAAGCAACCAAAAGGAGTCTTGCCATGTGA 3576 0.4379 MKRLRSSEDLHSYGDKNGCKDSNLNRSSSSSHRTFYYKPDNVRKGLLSSSSSASRYDRDRTMDEDREGSRLVRKRSDHDFDSFDRRKGFDRYRDTGDNRGYGAGGDRGLMQRSESFCGSRRDFPKGFRSERDRSRREGSVSSWRRFGGGLKDFDDSGRGSRVGLEDRVVRSPKTLRDVKSPTWSKDSESEHSKMSGQSRMRSSSRGSRDAKSKSKSPSWSKDSESEQSKSEQSKSVEVKKTEELQVESRSSSEMEEGELEPEPMPETEPEKVSDAAPKNEDQASIPLDADGKEIQTESQLNDTDTTTHEIREALNKEEGKPEEVANSAEQIVEQDEKLPEVQNDPTDKAHDTKNKIETSVHNDNKAEESSKVETTCKGETKEGAEHEKPLIHEEHKQDNGVEIETRAELHKEVSTENKVLKTDVETVTNVVKDKGKSVSVTATDVVHPSEDGLWNDRGPRDLTAYSGDAMEGPSTRGFELFSRSPVRKAEKTDQSSLSKHKDGSLSMEELDLSLSLPNVLLPIGAHETTPAPGSPSQARSVQSLSTFHTNSEGFTASMSFSGSQSFYHNPSCSLTQNSIDYEQSVHSRPLFQGIDQASHGGWQVMSQTDPKQKEIPYCQGTLINGSGSFSQSQATWGILDGQAVKGQPSRVLEGSSKMASGLDRQLSFPKQLSGQSRRNDDVRSPSQSVGSHDIGSNYSFDKKREKRDRSNGSLYRSASQKEQEQFQMGGIEFVETIIAKIVSEPVPAMAKKFHEMNGQTLSCLKESIREIMLNADKRGQILAFQKVLQNRSDITLEVLLKAHRVQLEILVALRTGLTNFIQLDNSISSADLAEIFLNLRCRNVLCRSQLPVDECDCKVCAQKNGFCRECMCLVCSKFDNASNTCSWVGCDVCLHWCHAECGLRESYIRNGHSTTGVQGVSEMQFHCIACDHPSEMFGFVKEVFLNFAKDWSVEALCKELEYVKRIFSASKDMRGRQLHGVADQMLLRLANKSNLQEVYSQIMSFLNDGDSSKLALTRNFSGKEQIKEKNAVAEPSQEAAWMKSIYSEKKPLLERPANILLSYDRNDKRAPPQELQMNVQKDYCFDELESIIKIKLAEAKMFQTRADDARREAEGLKRIALAKNEKIEEEYASRLSKLRLAETEEMRKQKFEEHQALERAHLEYFNMKMRMEADIKDLLLKMEATKRSLAM 1191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g2008 1191 MobiDBLite consensus disorder prediction 148 195 - -
Alju10g2008 1191 MobiDBLite consensus disorder prediction 466 504 - -
Alju10g2008 1191 MobiDBLite consensus disorder prediction 204 256 - -
Alju10g2008 1191 Pfam PHD - plant homeodomain finger protein 841 964 IPR032881 -
Alju10g2008 1191 MobiDBLite consensus disorder prediction 118 140 - -
Alju10g2008 1191 CDD PHD_OBE1_like 871 930 IPR047578 -
Alju10g2008 1191 Coils Coil 1110 1130 - -
Alju10g2008 1191 MobiDBLite consensus disorder prediction 483 504 - -
Alju10g2008 1191 MobiDBLite consensus disorder prediction 1 403 - -
Alju10g2008 1191 PANTHER VERNALIZATION-INSENSITIVE PROTEIN 3 1 1189 IPR004082 -
Alju10g2008 1191 MobiDBLite consensus disorder prediction 649 721 - -
Alju10g2008 1191 Pfam Coiled-coil region of Oberon 1063 1179 IPR032535 -
Alju10g2008 1191 MobiDBLite consensus disorder prediction 697 712 - -
Alju10g2008 1191 MobiDBLite consensus disorder prediction 18 36 - -
Alju10g2008 1191 MobiDBLite consensus disorder prediction 660 695 - -
Alju10g2008 1191 MobiDBLite consensus disorder prediction 1 16 - -
Alju10g2008 1191 Coils Coil 1168 1188 - -
Alju10g2008 1191 MobiDBLite consensus disorder prediction 333 403 - -
Alju10g2008 1191 MobiDBLite consensus disorder prediction 304 324 - -
Alju10g2008 1191 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 806 821 IPR004082 -
Alju10g2008 1191 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 1125 1147 IPR004082 -
Alju10g2008 1191 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 791 806 IPR004082 -
Alju10g2008 1191 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 951 970 IPR004082 -
Alju10g2008 1191 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 1086 1106 IPR004082 -
Alju10g2008 1191 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 832 853 IPR004082 -
Alju10g2008 1191 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 878 898 IPR004082 -
Alju10g2008 1191 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 752 774 IPR004082 -
Alju10g2008 1191 Coils Coil 1140 1160 - -
Alju10g2008 1191 MobiDBLite consensus disorder prediction 56 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g2008 Alju-ChrAlju10 39238112 39242461 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g2008 841 1007 PHD Gene Family AT5G57380 25.134 3.78e-12 68.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju10g2008 10 39238112 39242461 Alju10g2008 10 39238112 39242461 ECH