Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g2001 ATGGCCGCCAAGCGTGCTTTGCAGCCTCTATTGAAATGTTTGAGGGTGCCGGTTCAGCCTCTAAGTCAAAATATCTTCTCGATTTCCCCTCACTTGTTTCGACGCTTTTCCACGGAGGAGGTTAGAGGATGCTTTCTCGATAAGTCGGAGGTCACCGATCGCGTCATCTCCGTCGTCAGAAACTTCAAGAAAGTTAGTCCTTCCAAGGACTCTAGGAATTATGCCACTGCATCAGGGAAAAGGGAGGAAAAAGTAAAGGTGCCACTGGCCTTGTTTGGAGGTGCAGGAAATTATGCCTCTGCTTTGTATATTGCTGCAGTGAAAGCTAATTCACTGGAAAAGGTTGAGTCTGAGGTTCTTGACCTTGTTGAGGCAATAAAGAAGAGTCCTAAATTTGCACAGTTTACGAAGGACTTGTCTGTGCCTAAAGATACCAGAATTAAGGCCATCCAGGAAATTTCTAAGGAAGCTAAATTTTCAGATATTACGACAAACTTCCTTGTTATCGTGGCTGAGAATGGGAGGCTGAGAAACTTAGATAGCATAGCAAAGAAGTTTAAGGACCTGACAATGGCACATAAGGGAGAAGTGAGAGCTATTGTGACCACTGTTATTCCACTCCCCCCTCACGAAGAGAAGCAACTGAAAGAGATCCTTCAGGAGATCATAGGTGCAGGGAAGAAGGTTCTTATTGAAGAGAAGATTGATCCCAGCATCCTTGGTGGTTTAGTGGTAGAATTTAACCAGAAGGTCCTAGATGCTTCGATTAAGACTAGGGCTAACCAGATGGAGCGGTTCCTCCGAGAGCCCTTAACTCTCGGCGACATCTAG 831 0.4537 MAAKRALQPLLKCLRVPVQPLSQNIFSISPHLFRRFSTEEVRGCFLDKSEVTDRVISVVRNFKKVSPSKDSRNYATASGKREEKVKVPLALFGGAGNYASALYIAAVKANSLEKVESEVLDLVEAIKKSPKFAQFTKDLSVPKDTRIKAIQEISKEAKFSDITTNFLVIVAENGRLRNLDSIAKKFKDLTMAHKGEVRAIVTTVIPLPPHEEKQLKEILQEIIGAGKKVLIEEKIDPSILGGLVVEFNQKVLDASIKTRANQMERFLREPLTLGDI 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g2001 276 Gene3D - 93 187 IPR026015 -
Alju10g2001 276 PRINTS ATP synthase delta subunit signature 164 175 IPR000711 GO:0015986|GO:0046933
Alju10g2001 276 PRINTS ATP synthase delta subunit signature 242 260 IPR000711 GO:0015986|GO:0046933
Alju10g2001 276 PRINTS ATP synthase delta subunit signature 94 113 IPR000711 GO:0015986|GO:0046933
Alju10g2001 276 PRINTS ATP synthase delta subunit signature 227 242 IPR000711 GO:0015986|GO:0046933
Alju10g2001 276 PRINTS ATP synthase delta subunit signature 175 189 IPR000711 GO:0015986|GO:0046933
Alju10g2001 276 Pfam ATP synthase delta (OSCP) subunit 95 265 IPR000711 GO:0015986|GO:0046933
Alju10g2001 276 SUPERFAMILY N-terminal domain of the delta subunit of the F1F0-ATP synthase 93 196 IPR026015 -
Alju10g2001 276 Hamap ATP synthase subunit delta [atpD]. 90 269 IPR000711 GO:0015986|GO:0046933
Alju10g2001 276 NCBIfam ATP synthase F1 subunit delta 96 266 IPR000711 GO:0015986|GO:0046933
Alju10g2001 276 PANTHER ATP SYNTHASE DELTA CHAIN 69 269 IPR000711 GO:0015986|GO:0046933
Alju10g2001 276 ProSitePatterns ATP synthase delta (OSCP) subunit signature. 229 248 IPR020781 GO:0015986|GO:0016020|GO:0046933
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g2001 Alju-ChrAlju10 39167374 39173803 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g2001 134 276 Primary Pumps ATPases AT5G13450 63.636 3.37e-63 195