Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g1992 ATGGCTGGACCCCGTCGTAAGCGCCCCAAAATTGCCAGGGGAGAAGATGATTTTATGCCTGGAAGCATTGTCGAGATTGAGCTTCTTAAATTTATGACCTTTGACTACTTAAAATGTAAACCTGGTCCTCGTCTGAATCTTGTTATTGGACCCAATGGTTCTGGGAAGAGTTCTCTTGTGTGTGCCATTGCACTTGGCCTTGGGGGTGAACCTCAGCTGCTAGGACGAGCAACAAGTATTGGATCATATGTGAAGCGGGGAGAAGAATCAGCTTGCATTAAGATTACACTGAGAGGGGATAGTAAAGATGAGCATATCACTGTTATTAGGAAAATAAATACGAGTAACAAGTCTGAATGGTTGTTCAATGGAAGAGTAGTGCCCAAAAAGGAAATGATGGAAGTCATTCAACGGTTTAACATCCAAGTTAATAATTTGACTCAATTTTTACCCCAGGACAGGGTCTGTGAATTTGCTAAATTAACTCCCGTGCAACTTCTGGAAGAGACCGAAAAGGCTACTGGTGATCCCCAACTTCCAATCCTTCACCGTACTCTTGTTGATAAAAGCCGTGCATTGAAGCAAATTGAGCTGACAGTGAAGAAAAATGAAGAAACTTTGAATCAGCTAAAAGACCTTAATGCTGAACTTGAGAAGGATGTTGAACGTGTCCGTCAAAGGGATGAACTACTTAAAAAGGCTGAGTCCATGAAAAAGAAAGTGCCGTGGCTTAGATATGATATGAAGAAGGCTGAATACTTGGAAGCTAAAGAACATGAAAATGACGCTAAAAGGAAGATGGAGGAAGCTGCAAAGATGTTAAATGATCTGAAAGAACCCATCAAGAAACAGAAAAAGGACAAGGCAGCAATGGATGCAGAATGTAAAAAAGTTGCCAACCTTATAAATGGCAATGCCAAGAAGCGAATGGAACTTCTGGAGAAAGAAAACCATCTGGGTGTGGAATTACAAGGCAAATACAACGAAATGGAAGATTTGAGGAGGCAGGAAGAAACTCGTCAGCAAAGACTTTTAAAGGCTAAGGAGGAACTTGCTGCTGCTGAACATGAACTGGGGAATCTGCCTCATTATGAACCTCCAAAGGAAGAGATTGAAAGACTAAAAGAAGAAATTTTGAACTTGCAAAATTCTGCATCTCAAAAGAGGCTAGAGAAGTCAGAAACGGACAAATATGTATATCAGAAGAAGTCATCATTGGTACAGTGTATGGACAGGTTGAGGGAGATGGATAGTAAAAATACTAAGTGCTTGCGTGCGTTGCGAGAGTCAGGGGCAGAGAGGGTAGTGGAAGCTTATAAATGGGTGCAAGATAATAGCCATTTATTCAATAAGGAAGTTTATGGTCCTGTATTGCTGGAGGTTAATGTCTCGAAGCAGACTCATGCTGCCTTCCTGGAGGGTCATGTTCCTTATTACATCTGGAAGTCTTTCATTACTCAAGATTCTGAGGATCGGGACCTTTTGGTAAAAAAATTGAACTCCTTTGATGTTCCAGTATTAAATTATACTGGTGGTGATTGTAGTCAGAGAGAGCCCTTTCAAATTTCTGAAGATATGCGTACTCTTGGTATCTACTCCCGTCTTGATGAAGTTTTTGATGCTCCTACAGCTGTTAAAAAGGTTTTGATTGGACAGTTTGGTCTGGATCATTCATATATTGGAACCAGAGAAACTGATCAGAATGCAGATAGGGTCCAAAAATTGGGCATTTTTGACTTTTGGACTCCAGATAATCACTATCGTTGGTCTAAATCTAGATATGGGAATCATGTATCAGGAGTTGTTGAACAAGTACAACGCTCAAGACTTCTTTCATACAATATAGACGCTAGAGAAATTGAGAAGCTGAGGTCTCACAGAATGGACCTTGAAGAATCTATAGAAACCTTGGAAGCAACGTCTAGAAGGTTACAAGATGAGGAGAGGCGCCTAAGCAATGAAGAAGCTAATCTTCGCAGACAGCGGGATGAAATAAACACTACTGTGCTTAAAGAGAGGGAAAAGCGCCGGGATATCATGCGCACTATTGAACTGAGGAAAAGGAAATTAGAATCACTGGCGGAGGAGGGTGATGTGGATTTAGTTATTGCTAAGCTGACTGATGAAGCAAGAAATTGTAATATTCAGCGATTCCACAATGCAATCAAAATTAAGAACCTACTTCTTGAGGCAATTGGTTATAGACGGAGCTATGCTGAAAAACATATGGCTACTCTTGACTTTGATTCTAAGATTAGGGAGTTGGAGGCCGGTTTGAAGCAGCATGAGAAGCTTGGCCTACAAGCATCATCACAATTTGAAACCTGCAAGAAGGAGACTGAGAATTGCCGACAGCAGCTTTCAGAATGTCTGAGACGTGCTGAATCAATTGCTCCCATCACTCCAGATCTTGAGAAGGAATTTCTTGAGATGCCCACTACTATTGAGGATTTAGAAGCTGCTATCCAAGATACCACTTCTCAAGCCAATTCTATACTTTTTGTCAATCATAATGTATTAGAACAATATGAGAACCGTGAACGTCAGATAGGATCTTTAGCCACAAAAGTTGAAGAAGATAAGAAGGAAGTAAGCAGGTGTCTAACTGAAGTAGATGCCCTAAAGGGGACATGGCTTCCAACATTGAGGAACCTTGTGGCCCAGATAAACGAAACTTTCAGTCATAATTTCCTAGAGATGGCTGTTGCAGGAGAAGTTTCACTAGATGAGCGTGATGTGGACTTCGATCAGTTTGGGATACTCATAAAAGTGAAGTTCAGACCAACAGGACAGCTTCAAGTTCTGAGTGCCCACCATCAGTCTGGAGGGGAGCGATCAGTTTCTACTATTCTTTATCTTGTTTCTCTTCAAGATCTTACCAACTGCCCATTCAGAGTGGTTGATGAAATTAATCAAGGCATGGACCCAATAAATGAAAGAAAAATGTTCCAGCAACTAGTGAGAGCTGCCAGCCAGCCAAATACACCACAATGTTTCTTGCTTACCCCGAAGTTGTTACCAGATCTGGAATACGGTGAAGTGTGCAGTATATTAAATGTAATGAATGGGCCTTGGATTGAGAAAGTCTCAAAAGTTTGGGGTGAAGGTGATCGATGGGGGAAAATTGCAGGGTTGATGGTAGAGAATCAAGACTGA 3156 0.4129 MAGPRRKRPKIARGEDDFMPGSIVEIELLKFMTFDYLKCKPGPRLNLVIGPNGSGKSSLVCAIALGLGGEPQLLGRATSIGSYVKRGEESACIKITLRGDSKDEHITVIRKINTSNKSEWLFNGRVVPKKEMMEVIQRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKATGDPQLPILHRTLVDKSRALKQIELTVKKNEETLNQLKDLNAELEKDVERVRQRDELLKKAESMKKKVPWLRYDMKKAEYLEAKEHENDAKRKMEEAAKMLNDLKEPIKKQKKDKAAMDAECKKVANLINGNAKKRMELLEKENHLGVELQGKYNEMEDLRRQEETRQQRLLKAKEELAAAEHELGNLPHYEPPKEEIERLKEEILNLQNSASQKRLEKSETDKYVYQKKSSLVQCMDRLREMDSKNTKCLRALRESGAERVVEAYKWVQDNSHLFNKEVYGPVLLEVNVSKQTHAAFLEGHVPYYIWKSFITQDSEDRDLLVKKLNSFDVPVLNYTGGDCSQREPFQISEDMRTLGIYSRLDEVFDAPTAVKKVLIGQFGLDHSYIGTRETDQNADRVQKLGIFDFWTPDNHYRWSKSRYGNHVSGVVEQVQRSRLLSYNIDAREIEKLRSHRMDLEESIETLEATSRRLQDEERRLSNEEANLRRQRDEINTTVLKEREKRRDIMRTIELRKRKLESLAEEGDVDLVIAKLTDEARNCNIQRFHNAIKIKNLLLEAIGYRRSYAEKHMATLDFDSKIRELEAGLKQHEKLGLQASSQFETCKKETENCRQQLSECLRRAESIAPITPDLEKEFLEMPTTIEDLEAAIQDTTSQANSILFVNHNVLEQYENRERQIGSLATKVEEDKKEVSRCLTEVDALKGTWLPTLRNLVAQINETFSHNFLEMAVAGEVSLDERDVDFDQFGILIKVKFRPTGQLQVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKLLPDLEYGEVCSILNVMNGPWIEKVSKVWGEGDRWGKIAGLMVENQD 1051
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g1992 1051 Coils Coil 256 276 - -
Alju10g1992 1051 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5 5 1046 IPR027131 GO:0000724|GO:0005524|GO:0006281|GO:0016887|GO:0030915
Alju10g1992 1051 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 296 1002 IPR027417 -
Alju10g1992 1051 Coils Coil 371 391 - -
Alju10g1992 1051 Gene3D - 849 1007 IPR027417 -
Alju10g1992 1051 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 23 994 IPR027417 -
Alju10g1992 1051 Coils Coil 620 664 - -
Alju10g1992 1051 Gene3D - 22 218 IPR027417 -
Alju10g1992 1051 FunFam Structural maintenance of chromosomes 5 847 1018 - -
Alju10g1992 1051 Coils Coil 193 234 - -
Alju10g1992 1051 Pfam RecF/RecN/SMC N terminal domain 23 991 IPR003395 -
Alju10g1992 1051 Coils Coil 330 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g1992 Alju-ChrAlju10 38979643 38994775 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g1992 1 1042 Structural Maintenance of Chromosomes family AT5G15920 63.820 0.0 1370