Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g1984 ATGTTCTTCCAACGAAGCCATCACCATTTTCTTCTTCTTCTTCTGTCTCTTGTCATTATTCTTTCATCAGTTTCTGATCAGGCCTCTGGTTTCCATGGAAACCAGCAAGCACAAGCTCAAGACAAGTTTCAGAAGCTGAAGTACTTAAGAACCCGAAATGGTAATGATGATAAGATTTCAACCATCGATAAAAGCCTTTTTGAAGCAGAAGAGATTGATATTGAAGTTCAAGTTTATGAGCAAGAAGGGTTGAAAGAGAAAGATAGGATCGAGAAGCTTCCAGGTCAGCCTCCGGCTAGGTTTTCTCACTATGGAGGGTATGTGACTTTAAGTAAAAAAGAAGGACGTGCCTTTTATTATTATTTCACTGAAGCTGTTGGTAACAAGCAGAATTTGCCTCTCGTTCTCTGGCTTAATGGAGTGTCACATCGTGTTCCGGATTTTGTTATGGTAGGGAACCCAGCGATAAATGATGAGACAGACAACAAGGGAATGTACGATTTCCTAGGAAACCATGCAATATCATCGGAATTAACAGCTTCAAAGATCGACAAGTTCTGTGACTTCTCTCCAAATGTCACATATCAAAGTGACGAGTGCAATGAAGCTTTGGAGGAATCTGAGATGAATTTTAATGATATTGATATCTATAACATCTATGCTCCTCTCTGCAACAACCATAATCTCACTCTCACCCCCAAACCTACCACTATTGTTATAGATGAGTGTAATGAAATTTATGTGAAAGCATATATGAATAGAGGTGATGTTCAAGAGGCACTTCATGCGAATGTGACAAAAATGAACTACGCGTGGTCACCTTGCAGTTCTATTGCTTTGTTTTGGATGGATAGCCCATACACCACTCTTCCCCTCTTTCGTCAAATCATGGACCAAGGAATTAGGGTTTGGATTTTCAGTGGAGACGTAGATGGAAGAGTCCCTATTACTTCAACACTATCCTCTCTCAACACTATGAATATGAAAGTCAACACTCCATGGCATCCTTGGTACTTCAATGGACAGGTTGCTGGGTACACACAAGTGTATAAGGGAGATTTAACTTATGCCACAGTGAGGGGCGCAGGGCATCAAGTGCCAAGCTACGAGGCAGCAAGATCACTTTCTTTGTTCAAACACTTTTTAGATGGCACTCCTCTTCCTGATACCACTAGATATTGA 1182 0.4086 MFFQRSHHHFLLLLLSLVIILSSVSDQASGFHGNQQAQAQDKFQKLKYLRTRNGNDDKISTIDKSLFEAEEIDIEVQVYEQEGLKEKDRIEKLPGQPPARFSHYGGYVTLSKKEGRAFYYYFTEAVGNKQNLPLVLWLNGVSHRVPDFVMVGNPAINDETDNKGMYDFLGNHAISSELTASKIDKFCDFSPNVTYQSDECNEALEESEMNFNDIDIYNIYAPLCNNHNLTLTPKPTTIVIDECNEIYVKAYMNRGDVQEALHANVTKMNYAWSPCSSIALFWMDSPYTTLPLFRQIMDQGIRVWIFSGDVDGRVPITSTLSSLNTMNMKVNTPWHPWYFNGQVAGYTQVYKGDLTYATVRGAGHQVPSYEAARSLSLFKHFLDGTPLPDTTRY 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g1984 393 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 89 140 IPR001563 GO:0004185|GO:0006508
Alju10g1984 393 FunFam Carboxypeptidase 289 384 - -
Alju10g1984 393 SUPERFAMILY alpha/beta-Hydrolases 86 140 IPR029058 -
Alju10g1984 393 Gene3D - 289 384 - -
Alju10g1984 393 SUPERFAMILY alpha/beta-Hydrolases 149 388 IPR029058 -
Alju10g1984 393 Gene3D - 243 278 - -
Alju10g1984 393 Gene3D alpha/beta hydrolase 84 143 IPR029058 -
Alju10g1984 393 Pfam Serine carboxypeptidase 95 140 IPR001563 GO:0004185|GO:0006508
Alju10g1984 393 Pfam Serine carboxypeptidase 149 384 IPR001563 GO:0004185|GO:0006508
Alju10g1984 393 ProSitePatterns Serine carboxypeptidases, histidine active site. 354 371 IPR033124 GO:0004185
Alju10g1984 393 Gene3D alpha/beta hydrolase 147 233 IPR029058 -
Alju10g1984 393 FunFam Carboxypeptidase 240 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g1984 Alju-ChrAlju10 38885857 38890959 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g1984 248 387 Calmodulin-binding Proteins AT2G22960 32.857 1.13e-18 81.6