Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g1982 ATGACTTTCTTCAAACAAAGTCATCACCATCGTTTTCTTCTTCTGTCTCTTTTCATTATTCTTTCATCAGTTTCTGATCTGGCCTTTGGTTTCCATGGAAACCAGCAAGCAAAAGCTCAAGACAAGTTTCGGAAGCTGAAGTACTTGAGTGGCCAAAATGGTAATAATAATAATAAGATTTCAACAATTGATAAAAGCCTTTTTGAAGCAGAAGATATTGATATAGAAGCTCATGTTTATGAGCAAGAAGGGCTGAAAGAGAAAGATAGGATTGAGAAGCTTCCAGGTCAGCCTCCGGCTAGGTTTTCTCAGTATGGAGGGTATGTGACTGTGAATGAAGAAGCTGGACGTGCCTTTTATTATTATTTCACTGAAGCTTTTGATGATCATCAGTATTTGCCTCTCGTTCTTTGGCTTAATGGAGGGCCTGGATGTTCATCTCTTGGCTATGGAGCCATGCAAGAACTTGGACCCTTCAGAGTCAACAGTGATGGCAAAACCCTTTTCAAAAACAGATATTCATGGAACTATGTTGCAAATGTACTGTTCCTGGAGTCACCAGCAGGAGTGGGATTTTCATATTCAAACAAAACATCAGATTATAACAATAATGGAGACCAAAGCACAGCTTCAGAAAATTATATATTCTTGTTGAATTGGTTAGAAAGGTTTCCTGAATATAAGAACAGAGATTTCTTCATTACTGGAGAAAGCTATGCAGGTCACTATGTGCCTCAACTTGCTCAAACTATTCTCTTACACAACATCAAAGCCAACAAGACCATCATCAACCTCAAAGGAATCTTGATAGGGAATGCAGCCATAAATGATGAGACAGACGACAAGGGAATGTGTGATTTCCTCGAAAGCCATGCGATAATATCGGAATCGACATCTTTAATGATCAACAAGTTCTGTGATTTCTCTCCAAATGCCACAGATCAATCTCAACAGTGCAATCAAGCTTTGGAGGAACTAGACAGAGATTCTTACTATATTGATATATACAATATCTATGCTCCTCTCTGCCTCAACCCTAATCTCACTGCCACCCCCAAGCCTACCTCTGTTGTTTTAGACGAATGTAATGAAATTTATATGATAGCATATTTGAATAGAGGTGACGTACAAGAGGCACTTCATGCGAATGTGACAAAAGTGAACTACGAGTGGTCACCTTGCAGTGATGTGATTCAATACTGGCATGATAGCGCATCAACAACTCTTCCCCTCTTGCGTCAAATAATGGACCATGGAATTAGGGTTTGGGTTTTCAGTGGAGATACAGATGGAAGAGTTCCTGTTACTTCAACACAATACTCTCTAGAAGCTATGAATATGCAAGTCAACACTACATGGCATCCTTGGTACTTAAATGGACAGGTTGCAGGGTACACACAAGTGTACAAGGGAGACTTAACATTCGCCACAGTGAGGGGTGCAGGGCATCAAGTGCCAAGCTACGAGGCAGCAAGATCACTTTCTTTGTTCAAACACTTCTTAGATGGCACTCCTCTTCCTGATTCCACTATTTATTAA 1539 0.4016 MTFFKQSHHHRFLLLSLFIILSSVSDLAFGFHGNQQAKAQDKFRKLKYLSGQNGNNNNKISTIDKSLFEAEDIDIEAHVYEQEGLKEKDRIEKLPGQPPARFSQYGGYVTVNEEAGRAFYYYFTEAFDDHQYLPLVLWLNGGPGCSSLGYGAMQELGPFRVNSDGKTLFKNRYSWNYVANVLFLESPAGVGFSYSNKTSDYNNNGDQSTASENYIFLLNWLERFPEYKNRDFFITGESYAGHYVPQLAQTILLHNIKANKTIINLKGILIGNAAINDETDDKGMCDFLESHAIISESTSLMINKFCDFSPNATDQSQQCNQALEELDRDSYYIDIYNIYAPLCLNPNLTATPKPTSVVLDECNEIYMIAYLNRGDVQEALHANVTKVNYEWSPCSDVIQYWHDSASTTLPLLRQIMDHGIRVWVFSGDTDGRVPVTSTQYSLEAMNMQVNTTWHPWYLNGQVAGYTQVYKGDLTFATVRGAGHQVPSYEAARSLSLFKHFLDGTPLPDSTIY 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g1982 512 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 90 489 IPR001563 GO:0004185|GO:0006508
Alju10g1982 512 Gene3D - 362 399 - -
Alju10g1982 512 SUPERFAMILY alpha/beta-Hydrolases 92 507 IPR029058 -
Alju10g1982 512 Gene3D alpha/beta hydrolase 85 345 IPR029058 -
Alju10g1982 512 ProSitePatterns Serine carboxypeptidases, histidine active site. 473 490 IPR033124 GO:0004185
Alju10g1982 512 PRINTS Carboxypeptidase C serine protease (S10) family signature 184 194 IPR001563 GO:0004185|GO:0006508
Alju10g1982 512 PRINTS Carboxypeptidase C serine protease (S10) family signature 473 486 IPR001563 GO:0004185|GO:0006508
Alju10g1982 512 PRINTS Carboxypeptidase C serine protease (S10) family signature 220 245 IPR001563 GO:0004185|GO:0006508
Alju10g1982 512 PRINTS Carboxypeptidase C serine protease (S10) family signature 171 183 IPR001563 GO:0004185|GO:0006508
Alju10g1982 512 FunFam Carboxypeptidase 359 506 - -
Alju10g1982 512 Pfam Serine carboxypeptidase 96 503 IPR001563 GO:0004185|GO:0006508
Alju10g1982 512 FunFam Carboxypeptidase 408 503 - -
Alju10g1982 512 Gene3D - 408 503 - -
Alju10g1982 512 ProSitePatterns Serine carboxypeptidases, serine active site. 234 241 IPR018202 GO:0004185
Alju10g1982 512 FunFam Carboxypeptidase 85 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g1982 Alju-ChrAlju10 38819405 38825363 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g1982 370 506 Calmodulin-binding Proteins AT2G22960 32.117 1.90e-19 84.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju10g1982 10 38819405 38825363 Alju10g1982 10 38819405 38825363 ECH