Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g1965 ATGTCCAGAATTGAGGCTCCTCAACCCACATTACAATGCCAGAGGAAGATTCAAGAATCTTCCGCCATGAAAATTCAAACTACATTTCGGGGTTACCTTGCAAGGAAGGCTCTAAGGGCATTAAAGGGAATAGTGAAGCTTCAAGCTCTCATTAGAGGCAGAGCAGTAAGAAGGCAAACAATGAGCACTCTGAAGTGCTTGCAGTCACTTGTTGATATCCAGTCACAGGTCTGTGCCAAGAGACTCCAAATGGCTAAAGGGAGATGGGATTTTGATGAGAACCAAGAGATTCCAAGTTCAAGAGACAAGATAATAAGGATGGATTCAAACAGTGAAAGGAGGTGGGATGACAGCATTTTGTTGAAGGAAGACACAGATGCTTCTTACATGAGCAAGAAAGAAGCAGAAGTTAAGAGAGAACGAATGAAAGAATACACATTCAACCATCGAAGATCAGCAGAAACAGAGAGAAACAAGGTAAATGGAAGATGGAGGTATTGGATGGAGCAGTGGGTAGATACCCAACTTTCCAAAAGTAAGGAGCTTGAAGATTTAGATTCAGTCCTCTGTTCACATTACAGAGCAGGGGAAGAAGATGTAGGAGGAAGAAGACAGCTTCATCTGAGAAATATTCAGAGCCAAAGACAAAATCAGATTGAAGGCTTATATTCTCCAAAACTTGCTCCAATAAGAAAACCTTCTCCTCACAGAAGGCAACATTCTCTGGGAAATGATGAGCCTTCAAGCCCTTCTGTACTTCCAACTTACATGGCAGCAACAGAATCAGCCAGAGCAAAAGCAAGATCTTCAAGCTCCCCACGACTAAGAACAGTGAATGTGGTTGATGCAACAAAACTTGATGGCAACTCACCATGCACAAAGAAGCTAGCTTTTCTATCTTCTTCCATTAACCAGCAAAGATCTCCAAGTTTAAAGGGAATCTCAGGACCTATAAGATCAAACAGGACAATGAAGGATCTCAGCATGAACTCAGATAGCTCATTTCTGTACGGATATAACAGAGATTGGGATGGACAAGGTATCTTCGAATAA 1053 0.4188 MSRIEAPQPTLQCQRKIQESSAMKIQTTFRGYLARKALRALKGIVKLQALIRGRAVRRQTMSTLKCLQSLVDIQSQVCAKRLQMAKGRWDFDENQEIPSSRDKIIRMDSNSERRWDDSILLKEDTDASYMSKKEAEVKRERMKEYTFNHRRSAETERNKVNGRWRYWMEQWVDTQLSKSKELEDLDSVLCSHYRAGEEDVGGRRQLHLRNIQSQRQNQIEGLYSPKLAPIRKPSPHRRQHSLGNDEPSSPSVLPTYMAATESARAKARSSSSPRLRTVNVVDATKLDGNSPCTKKLAFLSSSINQQRSPSLKGISGPIRSNRTMKDLSMNSDSSFLYGYNRDWDGQGIFE 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g1965 350 Gene3D - 16 77 - -
Alju10g1965 350 PANTHER IQ-DOMAIN 5-RELATED 15 311 - -
Alju10g1965 350 MobiDBLite consensus disorder prediction 215 253 - -
Alju10g1965 350 Pfam IQ calmodulin-binding motif 20 39 IPR000048 GO:0005515
Alju10g1965 350 ProSiteProfiles IQ motif profile. 18 46 IPR000048 GO:0005515
Alju10g1965 350 SMART iq_5 40 61 IPR000048 GO:0005515
Alju10g1965 350 SMART iq_5 17 39 IPR000048 GO:0005515
Alju10g1965 350 ProSiteProfiles IQ motif profile. 42 69 IPR000048 GO:0005515
Alju10g1965 350 Pfam Protein of unknown function (DUF4005) 234 305 IPR025064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g1965 Alju-ChrAlju10 38568044 38570649 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g1965 21 320 IQD Protein Family AT5G13460 47.385 2.53e-85 263