Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g1958 ATGGCTTTGGATTCTAAAGACACTCATCGTCTAAATGAAGAACAAGATGCGTACGGCCTTTCTGCCATGCTTCACGGTTGTAGCCAGGTCTACTGTGCAGTTCTAAAAGCTTCGCTTGAGCTCAACTTGTTTGAGATAATAGCCAAGGAAGGAGGAAGACACGTGTCAGCCTCTGAAGTTGCTTCAAAGCTTCCAAGTTCATCTCAACACAAAGATTTAGCTTCTAGGATCGATCGTCTCTTGAGGCTTCTTGCAAGTCACTCTCTTCTGAATTGTTCGGTTCGAGAGAAGGAAGATGGTGGCTCTGAGAGACTCTATGCAATTTCTCCTGTTGGAAGCTACTTTGTTGGTGATGGTGGACTCAAGACTCTTTTCTCATCATTCATTTGTCACAGGGCACTTATGGATGCTTGGATGAATTTTAAGGTTGCCATTATAGAGGAAGACACTGACTTATTCAAGAAAGTACATGGAATACCAATGTACCAATACGCAGAGAGAGATCCAACATGGAACAACATTTTCAACAAAGCAATGGCCAACGTTTGCGACATAGAGATGAGAAGAATTTTGGAAATATACAAAGGATTTGAGGGAGTATCAACACTTGTTGATGTTGGAGGTGGTACTGGCCAAAACCTTAAAATGATTGTTTCTAAGTACCCTTCAATTAAGGGCATCAATTTTGATTTGCCCAATGTTATTCAAAATGCACCACCTCATCCAGGGATCGACCACGTTGGAGGGGACATGTTTGAAAGTGTTCCGAAGGGTGATGTTATTATGTTGAAGGCAGTATGCCACAATTGGTCAGATGAAAATAGCATAAAAGTGTTGAGGAAATGCCACGAAGCATTGCCAGAGAAAGGGAAGGTGATAGTGATTGAGGTGATAATGCCTGAAGTAATTGGATCAACAGAAGAAGCCAAGCTTGCAGCAAGCTTGGACAATCTCATGTTCCTTCATGATGGAAGAGAAAGAACAGAGAAAGAATTTGAATCTCTTTGCAAACGTTCTGGCTTTTCTGCTTTCAAACTCGCTTCTCGTGCTTTCTCTGCTTTAGGAGTTATGGAATTCTACAAATAA 1086 0.4153 MALDSKDTHRLNEEQDAYGLSAMLHGCSQVYCAVLKASLELNLFEIIAKEGGRHVSASEVASKLPSSSQHKDLASRIDRLLRLLASHSLLNCSVREKEDGGSERLYAISPVGSYFVGDGGLKTLFSSFICHRALMDAWMNFKVAIIEEDTDLFKKVHGIPMYQYAERDPTWNNIFNKAMANVCDIEMRRILEIYKGFEGVSTLVDVGGGTGQNLKMIVSKYPSIKGINFDLPNVIQNAPPHPGIDHVGGDMFESVPKGDVIMLKAVCHNWSDENSIKVLRKCHEALPEKGKVIVIEVIMPEVIGSTEEAKLAASLDNLMFLHDGRERTEKEFESLCKRSGFSAFKLASRAFSALGVMEFYK 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g1958 361 Pfam Dimerisation domain 34 85 IPR012967 GO:0046983
Alju10g1958 361 CDD AdoMet_MTases 202 299 - -
Alju10g1958 361 PANTHER O-METHYLTRANSFERASE 32 351 IPR016461 GO:0008168
Alju10g1958 361 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 23 361 IPR016461 GO:0008168
Alju10g1958 361 FunFam Caffeic acid O-methyltransferase 117 361 - -
Alju10g1958 361 FunFam Caffeic acid 3-O-methyltransferase 2 115 - -
Alju10g1958 361 PIRSF O-mtase 1 361 IPR016461 GO:0008168
Alju10g1958 361 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 128 348 IPR029063 -
Alju10g1958 361 SUPERFAMILY "Winged helix" DNA-binding domain 19 119 IPR036390 -
Alju10g1958 361 Gene3D Vaccinia Virus protein VP39 172 348 IPR029063 -
Alju10g1958 361 Gene3D - 30 190 IPR036388 -
Alju10g1958 361 Pfam O-methyltransferase domain 138 342 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g1958 Alju-ChrAlju10 38461277 38465758 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g1958 16 361 Monolignol Biosynthesis Gene Families AT5G54160 47.143 8.94e-107 316