Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g1956 ATGGCTTTGGAGTCCAAAGAGAACCATCATCATAAAGTGGAAGATGAAGATTCATATGTTCTTTTTGCCATGCATATGTGTTGTAGTCAGATCTATTCTGCAGTTTTAAACGCAGCTCTTGAGCTCAACTTGTTTGAGATCATAGCTAAGGAAGGAGGAAGGCACGTGTCAGTCTCTGAGGTTGCTTCAAAGCTTCCAAGTTCATCTCAACACAAAGACTTAGCTTTCAGGATCGATCGTCTCTTGAGGCTTCTTGCAAGTTACTCTCTTCTGAATTGTTCAGCTCGTGAGAAGGAAGATGGTGGCACTGAGAGACTCTGCAATTTCTTCCGTTGGAAAGTACTTTGTTGCTATTTGAGATCATTTTCAAAAACTATATATGAAGGGATTGAGCATGTTGGAGGAGATATGTTTGAAAGTGTTCCAAAAGGTGATGCCATTATACTAAAGGCTGTATGTCACAATTGGTCAGATGAAAATAGCGTTAAAGTATTGAGGAAATGCCACGAAGCATTGCCAGAAAAAGGGAAGGTGATAGTGATTGAGTTCATAATACCTCAAGTAATTGGACCAACAGAAGAAGCCAAGTTTGTAGCAACCATGGACAATCTCATGTTTCTTCATGATGGAAGAGAAAGAACTGAGAAAGAATTTGAATCTCTTTGCAAAAGTTCTGGTTTTTCTGCTTTCAAAGTTGCTTGTCGTGCCTTCACTATTCTTGGAGTCATGGAAGTCTACAAATAA 744 0.3938 MALESKENHHHKVEDEDSYVLFAMHMCCSQIYSAVLNAALELNLFEIIAKEGGRHVSVSEVASKLPSSSQHKDLAFRIDRLLRLLASYSLLNCSAREKEDGGTERLCNFFRWKVLCCYLRSFSKTIYEGIEHVGGDMFESVPKGDAIILKAVCHNWSDENSVKVLRKCHEALPEKGKVIVIEFIIPQVIGPTEEAKFVATMDNLMFLHDGRERTEKEFESLCKSSGFSAFKVACRAFTILGVMEVYK 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g1956 247 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 247 IPR016461 GO:0008168
Alju10g1956 247 Pfam Dimerisation domain 35 86 IPR012967 GO:0046983
Alju10g1956 247 PANTHER O-METHYLTRANSFERASE 29 104 IPR016461 GO:0008168
Alju10g1956 247 Pfam O-methyltransferase domain 122 228 IPR001077 GO:0008171
Alju10g1956 247 Gene3D Vaccinia Virus protein VP39 119 247 IPR029063 -
Alju10g1956 247 SUPERFAMILY "Winged helix" DNA-binding domain 15 107 IPR036390 -
Alju10g1956 247 CDD AdoMet_MTases 127 181 - -
Alju10g1956 247 Gene3D - 2 118 IPR036388 -
Alju10g1956 247 FunFam Caffeic acid 3-O-methyltransferase 2 119 - -
Alju10g1956 247 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 126 245 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g1956 Alju-ChrAlju10 38405493 38407916 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g1956 127 239 Monolignol Biosynthesis Gene Families AT5G54160 55.652 2.70e-38 135