Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g1954 ATGGCTTTGTTGGATTCGAAAGAGAAACCAAAAACTGTGAAGGAAGAAGAAGAAAACGACGACGTTGATTCGTCTGTGCTTTCAGCTTTTCTTCTTCGCAGTAGCCAGATCTTCTCTGCAGCTCTGAACGCCGCTGTTGAACTCAACTTGTTCGACATCATTTCCAACGAAGGAGGAAGACACGTGTCGGCTTCTGAAGTGGCTCGTCGGCTTCCAAGTTCAACTCAGCACAGAGACTTGGCTTCAAGAATCGATCGTCTCTTGAGGCTTCTCGCCAGTCACTCTCTTCTCGATTGCAGGGTTCGTGAGAAGAAGGAAGAAGAAAAAGATGGTTCCACTGAAAGACTTTATGCCCTTTCTTCCATAGGCAGGCACTTTGTGAGTGGATCGTTGGGATTCGTACCAATCTTTTCTCATCCTGCACTCATGCAAGCTTGGCTCAACTTTAAGGATGCAATAATAGATGAAGACAGCGACTTGTTCAAGAAAGTTCATGGAATGCCAATGTACCAATACGCAAAGTCTGATCCAACATGGAATAAAACTTTCAACCAAGCAATGGCCAACTTTTGCAGTATGGAGATGAAAAGGATTCTGGAAAAATACGAAGGATTTGAGGGAATATCAACAATTGTTGATGTTGGAGGCGGCACTGGTCAAAACCTTAAAATGATTGTCTCTAAGTATCCTACAATTAAGGGTGTCAATTTTGATTTGCCCCAAGTCGTTCAAAATGCACATTCCATTCCAGGGATTGAACATGTTGGAGGAGATATGTTTGAAAGTGTTCCAAAAGGTGATGCCATGATATTGAAGGCTGTATGTCACAATTGGTCAGATGAAAATTGCTTAAAAGTGTTGAAGAAATGTCATGAATCATTACCAGAAAAAGGGAAGGTGATGGTGGTGGAGTTTATAATGCCTGAAGCAAATATGGCAACAGAAGAAGCCAAGTATGTGTCAATCTTGGACAACCTCATGTTCCTTCATGATGGAAGAGAAAGAACCGAGAAGGAGTTTGAGTCTCTTTGTAAAAATTCTGGATTTTCAAGCTTCAAAGTTGCTTGTCGTGCTTTTTCTGCTTTAGGAGTCATGGAATTTTGCAAATAA 1110 0.4162 MALLDSKEKPKTVKEEEENDDVDSSVLSAFLLRSSQIFSAALNAAVELNLFDIISNEGGRHVSASEVARRLPSSTQHRDLASRIDRLLRLLASHSLLDCRVREKKEEEKDGSTERLYALSSIGRHFVSGSLGFVPIFSHPALMQAWLNFKDAIIDEDSDLFKKVHGMPMYQYAKSDPTWNKTFNQAMANFCSMEMKRILEKYEGFEGISTIVDVGGGTGQNLKMIVSKYPTIKGVNFDLPQVVQNAHSIPGIEHVGGDMFESVPKGDAMILKAVCHNWSDENCLKVLKKCHESLPEKGKVMVVEFIMPEANMATEEAKYVSILDNLMFLHDGRERTEKEFESLCKNSGFSSFKVACRAFSALGVMEFCK 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g1954 369 Gene3D - 5 126 IPR036388 -
Alju10g1954 369 FunFam Caffeic acid O-methyltransferase 125 369 - -
Alju10g1954 369 CDD AdoMet_MTases 210 307 - -
Alju10g1954 369 Pfam O-methyltransferase domain 146 350 IPR001077 GO:0008171
Alju10g1954 369 Pfam Dimerisation domain 41 92 IPR012967 GO:0046983
Alju10g1954 369 PIRSF O-mtase 6 369 IPR016461 GO:0008168
Alju10g1954 369 PANTHER O-METHYLTRANSFERASE 32 352 IPR016461 GO:0008168
Alju10g1954 369 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 30 369 IPR016461 GO:0008168
Alju10g1954 369 FunFam Caffeic acid 3-O-methyltransferase 6 126 - -
Alju10g1954 369 Gene3D Vaccinia Virus protein VP39 130 369 IPR029063 -
Alju10g1954 369 SUPERFAMILY "Winged helix" DNA-binding domain 23 129 IPR036390 -
Alju10g1954 369 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 131 359 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g1954 Alju-ChrAlju10 38367098 38370532 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g1954 23 359 Monolignol Biosynthesis Gene Families AT5G54160 46.512 3.83e-105 312