Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g1948 ATGGTTAGCAGTTCCATCTCTGTGAGGTATCCATTTGAACCAGAGTTTGTAAGAAATTTAACGAAAGGTACAGTTTTTCCTGCTCAAATTTATGCTTCCGATGTCGTTCGATGAGAACAAAAGGTGAAGTCAGGGCCCAAACTGCAGCAGCGCTATGGTTCTCAAGTAAGTTGTACCCTTCCTTTTCTACGTCACGTCTTGTCTTATGCTGCCTTCAAAGCATTGGTTTCTGCATACCCTGACCCCCAAAATCTGACAGAGCTCTGTCGTTTTAGTGGGGGCAAAATCTACCCTGGGAAGGGCATCAGATTTGTTCGTGGTGATTCTCAGGTCTTTTTGTTTGCCAACTCAAAATGCAAGAGGTACTTTCATAACAGATTGAAGCCTTCAAAGCTCACCTGGACTGCCATGTACAGGAAGCAACACAAGAAGGACATTGCCCAAGAAGCCGTGAAGAAGAGGCGTCGCACCACCAAAAAGCCTTACTCTAGGTCTATTGTTGGTGCTACTTTGGAAGTTATCCAAAAGAAAAGAACTGAGAAACCAGAGGTTCGAGATGCTGCCAGGGAAGCTGCTCTCCGTGAGATTAAGGAGAGGATCAAGAAAACAAAGGATGAGAAGAAGGCAAAGAAAGCAGAAGTGATGGCCAAGACACAAAAAGCACAAGGAAAAGGAAATGTTCCAAAGGGTGCTGCCCCCAAAGGTCCTAAACTTGGGGGAGGCGGCGGGAAGCGTTGA 738 0.4593 MVSSSISVRYPFEPEFVRNLTKGTVFPAQIYASDVVRXEQKVKSGPKLQQRYGSQVSCTLPFLRHVLSYAAFKALVSAYPDPQNLTELCRFSGGKIYPGKGIRFVRGDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRTTKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALREIKERIKKTKDEKKAKKAEVMAKTQKAQGKGNVPKGAAPKGPKLGGGGGKR 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g1948 245 Coils Coil 193 220 - -
Alju10g1948 245 Gene3D Ribosomal protein L24e 85 145 IPR038630 -
Alju10g1948 245 FunFam 60S ribosomal protein L24 85 145 - -
Alju10g1948 245 ProSitePatterns Ribosomal protein L24e signature. 91 108 IPR023442 -
Alju10g1948 245 SMART 4TRASH 89 127 IPR011017 -
Alju10g1948 245 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 87 139 - -
Alju10g1948 245 MobiDBLite consensus disorder prediction 199 217 - -
Alju10g1948 245 Pfam Ribosomal protein L24e 86 148 IPR000988 -
Alju10g1948 245 Gene3D - 150 221 - -
Alju10g1948 245 MobiDBLite consensus disorder prediction 199 245 - -
Alju10g1948 245 PANTHER 60S RIBOSOMAL PROTEIN L24 86 236 IPR000988 -
Alju10g1948 245 CDD Ribosomal_L24e_L24 86 137 IPR000988 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g1948 Alju-ChrAlju10 38256996 38259757 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g1948 86 238 Cytoplasmic Ribosomal Protein Gene Family AT2G36620 84.967 8.34e-84 245