Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g1943 ATGGTTCAAAGGAAGGTACCGAGCAAGCTTGGTATCCAAGCTGATCATCATCATGTTAAATCTGATAAGCGCTTGGCAAACTTCAGCCAAGAAGGTAAAACCAGAGGAGGAGTTGATATTATGAAAAAGAAGAAAATGAAGAAGTCCAAGTCTATTAAGCTTTCTGATATGGAGATTCTCAAATCATCATCAAAGAAGCCTCCTTCTTTTGTTCAAGTTCATCATCCTACTACTGTATCATCGTCTTCCCCACAAAAGTTGATACCTTTGATCAGAACCAGTGACGGCTCGCCCAATTACATGAAGCCCACAAGCAGTTCAGATGCAAAGAAGGAACTTTTTCCTGTGAGTCTTCGAAACTCTAAATCTAATAACTCAAAGTCTAATAGCTCTGTTTCTGCTAAGAAACCTGCAAAACCTTTGACAAAGTCATCACCTAGTTTGAAGCTTGTGAGAACCTTAACTAAGACTCCAAGTTTTAAGAAATCCTCTAGAGTTCCTCTTTGTGCTGATATGAATACTCAGAGAGCTACCTGTTCTTCAACTTTAAAGAACTCAAAGTTTCCTCCTTACCTCATGCTTAATCCTGGGGCTACTGAATCTGAAGGAACTTCAGTTATGAAGGTTTGCCCTTATACCTATTGTTCTCTGAATGGTCATCATCATGCTCCTTTGCCTCCATTGAAGAGCTTCTTGTCGGCAAGGAGACGTATTTTGAAGACCCAGAAGAGTATGAAGATGGAAGCCTTGAGTCCTCGGAAGTTGAAGGTACCCTGTGAGCCAAAGAAGGAATCTGATACTGACATGGATTTCTTCATTGAAATCTATGCTTCTAAGCAAAATGGGGATGAAGAAAACATCAAGCCTACAATGGAGGAGGAGGAGAACTTTGTGATACAAGGAGATTATGATGATATGAAGCAAGTTGTTGCAAGCCTGTCTGATGGATCTCCAAAGTCTCAGATAGATTCTGAGAAGGATTATGGAAAGTACTTTGATGATGCTAAAATTGAACAAGAAGCCAAATTTGCAGATGAAAAGGATTTACCTATCTGGTCTGGTGAAGAAATAAGCATTGAAAGCTATTGCAGTGAGGTTAGCTATGAGGGGAAAATATTGGATGGTTCTGATTCTGAAGCTACTGATATGGAATGGGAGCATGAAGAGGATGATGATGATGCTGATTCTTCAATTCTCACAGAGGAGAATGACTCAAAAGTTGAATCATTATCTGAGAGTTCACATGATGTTTCTGTGATGTGGTTAAATGACATCATTAGCATCTATTATGAAGACATTGTTGCTGAAGTTTCCCAGGAATCTAAAGCCAAAGAAAGTGTCTGTTTTGAATCAAACATGGAAGGGACAGATGAAAGCTTGGAGACTCAAGAAGGAAACGGTGGAGAAAATGAAACAGTCATGGATGCCACAGTGCACTCTTCAAATTTCACAGAGGAGACATTGGAAGAACTAGAAGAAACCGGCAAGCAGAATCATGAAAACAATGATGTTTTGGAGGCAGAGAATTTGGTGAACAAGGAATTACTGGATCTGGAGGAGAACCATGAGGCAGATTGCATCGATACAGTACATAACGATATCTTTGATGAACAGGAAAATATGTCTCTCCAACAACATGATTCAAGTATGTTACGGACTGGCCAAATTACAGAACCACTTGTTGCTGAGACTAATAATAAAATGAAAGAGGAAGATAATGCAGATTTCAAGGAAGAAATAGTTGGAAATTATGTTTCTGATGCGTCTCATGATTGTTGTGAAGCTTCAGAGGTTAATAATAGCCAAGGCCAGGAGGTGTGTGAACCTTGTGAGGCTGATAAGGTCAGTGAAGAAAAGAACTCAAGCCAATATATTATTGAAGAAGACAAGTTGGAGAGCTCAAGAAATAATTGGAAAGGGGTTGGTGGAAGGCGAAAGAGAGTGATTCAAGACGAGGATGAAATGAGGAAGTTCAACCCTCGGGAGCCGAATTTCCTGCCTTTGGTTCCAGATCCAGAAGCAGAAAAGGTTGATCTGAAGCATCAGATGATGGATGAGAGGAAAAATGCAGAGGAATGGATGGTTGATTATGCTCTAAGACAAACCGTCACAAAGCTTGCTCCTGCTAGGAAGAGGAAAGTGGCACTGCTAGTGGAAGCTTTCGAATCACTTGCAGCTGAGGTAATGGATGGTTGGAGGTGA 2202 0.4042 MVQRKVPSKLGIQADHHHVKSDKRLANFSQEGKTRGGVDIMKKKKMKKSKSIKLSDMEILKSSSKKPPSFVQVHHPTTVSSSSPQKLIPLIRTSDGSPNYMKPTSSSDAKKELFPVSLRNSKSNNSKSNSSVSAKKPAKPLTKSSPSLKLVRTLTKTPSFKKSSRVPLCADMNTQRATCSSTLKNSKFPPYLMLNPGATESEGTSVMKVCPYTYCSLNGHHHAPLPPLKSFLSARRRILKTQKSMKMEALSPRKLKVPCEPKKESDTDMDFFIEIYASKQNGDEENIKPTMEEEENFVIQGDYDDMKQVVASLSDGSPKSQIDSEKDYGKYFDDAKIEQEAKFADEKDLPIWSGEEISIESYCSEVSYEGKILDGSDSEATDMEWEHEEDDDDADSSILTEENDSKVESLSESSHDVSVMWLNDIISIYYEDIVAEVSQESKAKESVCFESNMEGTDESLETQEGNGGENETVMDATVHSSNFTEETLEELEETGKQNHENNDVLEAENLVNKELLDLEENHEADCIDTVHNDIFDEQENMSLQQHDSSMLRTGQITEPLVAETNNKMKEEDNADFKEEIVGNYVSDASHDCCEASEVNNSQGQEVCEPCEADKVSEEKNSSQYIIEEDKLESSRNNWKGVGGRRKRVIQDEDEMRKFNPREPNFLPLVPDPEAEKVDLKHQMMDERKNAEEWMVDYALRQTVTKLAPARKRKVALLVEAFESLAAEVMDGWR 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g1943 733 SMART CaM_binding_2 615 726 IPR012417 GO:0005516
Alju10g1943 733 MobiDBLite consensus disorder prediction 1 148 - -
Alju10g1943 733 Pfam Plant calmodulin-binding domain 625 724 IPR012417 GO:0005516
Alju10g1943 733 MobiDBLite consensus disorder prediction 65 106 - -
Alju10g1943 733 MobiDBLite consensus disorder prediction 381 398 - -
Alju10g1943 733 Coils Coil 488 508 - -
Alju10g1943 733 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 1 724 IPR044681 GO:0005516
Alju10g1943 733 MobiDBLite consensus disorder prediction 10 29 - -
Alju10g1943 733 MobiDBLite consensus disorder prediction 117 148 - -
Alju10g1943 733 MobiDBLite consensus disorder prediction 377 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g1943 Alju-ChrAlju10 38180609 38183535 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g1943 58 724 Calmodulin-binding Proteins AT2G38800 32.286 6.09e-73 247