Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g1918 ATGTCAATACCATTGTTGATGGAGTCCCTCGTTCTTAATCTCCATGAGATCTCAGCAGTCAAATTTGGCAACTTCAAGCTCAAATCTGGCATTTCTTCACCAATATACTTAGACCTCCGACTCATTATATCATACCCTTCGCTCCTCCGCCAAGTCTCCCAAACACTGATCTCTTCTGTCTCTTCCTCTTCCTTTGATCTTGTATGTGGTGTCCCTTACACTGCTCTACCCATTGCTACTTGTGTCTCAGTCACTCAGAATATTCCCATGGTCATGCGCCGCAAGGAAATCAAAGACTATGGCACTGCTAAAGCCATTGAAGGTGATTTCAAGGCCGGCCAAAGTTGCTTAATAATTGAGGATTTAGTTACCAGTGGCACTTCAGTATTAGAAACTGCTGCGCCCCTGCGTGCTGCAGGGTTAAAGGTGAGTGATGCTGTTGTTTTGATTGATAGAGAGCAAGGCGGTAGAGAGAATTTGGAGGAGAATGGGATCAGGCTACATTCGATCATCAAATTGACTGAAATGGTAAACATTTTGAGGGAAGAGGGAAAGCTTGAGAAGGATATGGTAGATGTTGTTATGAAATTCTTGGAAGAGAATCAGAGGGTTGCTGCATTGGCAAAATTAGGGAAGCCTAAGAGGGTCAAGGCTTTGTCATTTGGGAAAAGGGCTAAGTTGTCGAAGAATCCTACAGGAAAGAGGTTGTTTGAGATAATGGCTGAGAAGGAGAGTAATCTTTGTTTGGCTGCAGATGTGGGAACTGCAGCTGAATTGCTTGAAATTGCAGAAAAGGTTGGGCCTGAGATATGCTTGCTGAAGACTCATGTGGATATTTTGCCGGAATTTACTCCTGATTTTGGTTCAAAGCTTCGCATGATTGCAGAGAAACATAATTTCTTAGTCTTTGAGGATCGTAAATTTGCAGACATTGGTAACACAGTTACTATGCAATATGAAGGGGGGATTTATCACATATTGGAGTGGGCTGATATAGTAAATGCTCACATTATTTCTGGTCCTGGAATTGTTGATGGATTGAAATCGAAGGGTTTGCCTCAGGGTAGGGGTTTGTTGTTGCTTGCTGAAATGAGCTCAGCCGGCAACCTTGCCACGGGAGATTATACGGCTGCAGCAGTGAGAGTCGCCGAGGAACATTCTGACTTTGTGATTGGCTTTATTTCAGTCAATCCTGCATCATGGCCAGGGCAACCAGTAAATCCTTCTTTCATTCATGCAACTCCTGGAGTTCAAATGGTGACCGGTGGTGATGCATTAGGGCAGCAATATAACACTCCGTATTCTGTGATCTATAATAAGGGAAGTGACATAATAATTGTGGGTCGTGGCATCATAAGGGCATCAAATCCAGCAAAGGCAGCTCATGAATATAGACTTGAAGGATGGAAAGCTTATTTGGCCAAGTGTAATGGAATTGTAACATGA 1446 0.4329 MSIPLLMESLVLNLHEISAVKFGNFKLKSGISSPIYLDLRLIISYPSLLRQVSQTLISSVSSSSFDLVCGVPYTALPIATCVSVTQNIPMVMRRKEIKDYGTAKAIEGDFKAGQSCLIIEDLVTSGTSVLETAAPLRAAGLKVSDAVVLIDREQGGRENLEENGIRLHSIIKLTEMVNILREEGKLEKDMVDVVMKFLEENQRVAALAKLGKPKRVKALSFGKRAKLSKNPTGKRLFEIMAEKESNLCLAADVGTAAELLEIAEKVGPEICLLKTHVDILPEFTPDFGSKLRMIAEKHNFLVFEDRKFADIGNTVTMQYEGGIYHILEWADIVNAHIISGPGIVDGLKSKGLPQGRGLLLLAEMSSAGNLATGDYTAAAVRVAEEHSDFVIGFISVNPASWPGQPVNPSFIHATPGVQMVTGGDALGQQYNTPYSVIYNKGSDIIIVGRGIIRASNPAKAAHEYRLEGWKAYLAKCNGIVT 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g1918 481 SMART OMPdecase_2 246 464 IPR001754 GO:0004590|GO:0006207
Alju10g1918 481 FunFam Uridine monophosphate synthetase 5 207 - -
Alju10g1918 481 NCBIfam orotate phosphoribosyltransferase 14 175 IPR004467 GO:0004588
Alju10g1918 481 SUPERFAMILY PRTase-like 7 197 IPR029057 -
Alju10g1918 481 SUPERFAMILY Ribulose-phoshate binding barrel 219 474 IPR011060 -
Alju10g1918 481 Hamap Orotate phosphoribosyltransferase [pyrE]. 1 230 IPR023031 GO:0004588|GO:0006221
Alju10g1918 481 ProSitePatterns Orotidine 5'-phosphate decarboxylase active site. 302 315 IPR018089 GO:0004590|GO:0006207
Alju10g1918 481 NCBIfam orotidine-5'-phosphate decarboxylase 247 465 IPR014732 GO:0004590|GO:0044205
Alju10g1918 481 Gene3D Aldolase class I 217 479 IPR013785 -
Alju10g1918 481 FunFam Uridine monophosphate synthetase 216 477 - -
Alju10g1918 481 Pfam Orotidine 5'-phosphate decarboxylase / HUMPS family 245 464 IPR001754 GO:0004590|GO:0006207
Alju10g1918 481 CDD PRTases_typeI 65 172 IPR000836 -
Alju10g1918 481 Pfam Phosphoribosyl transferase domain 60 158 IPR000836 -
Alju10g1918 481 CDD OMP_decarboxylase_like 247 464 - -
Alju10g1918 481 Gene3D - 6 209 IPR029057 -
Alju10g1918 481 PANTHER OROTATE PHOSPHORIBOSYLTRANSFERASE 6 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g1918 Alju-ChrAlju10 37219726 37223275 Wgd