Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g1917 ATGGATGCTTACTTGCACATTGTGCGCAGAACTCATCACCATCATCAGACTACAGACCCAAAATACATTGGAAGCCCTAGCTCTCCCCTGGCTTCTCTAGTCACGCGCCTCCAGTCTCCACCCTCAAAGGTCGTCCGCGCCGTTACAGTCTTGCTGTTGTCGACAAGGAAGAGATCGTTATTAGAGAAATGCTGGTTTTGCTCTTCAACCGTATACCCTGGACATGGAATCCAGTTCGTTCGTAATGATGCAAAGATTTTTCGATTTTGTAGATCTAAATGCCACAAGAACTTTAAAATGAAGAGGAATCCTCGTAAAGTAAAATGGACCAAGGCATATCGTCGATTGCACGGAAAGGATATGACACAGGATTCAACCTTCGAGTTTGAGAGAAAGCGAAACAGACCTGAAAGATATGATCGGAGTCTTGCAGAAGATGTCCTCAAGGCTATTCCAAAGATTGACAAGATCAGAGTTGGCAGGGAGGAGAGACACCACAAGAATAGAATGAAAGGCAACAAGGCCAAGCTGCTCAAGGAGGCTGCAAGGGAGTTGGAGCAGGGCATCAATTTGGTCAAAGCTCCATCTGTGCTTCAACATGATCCATCTCTCACATTACCAAAGATCAAAGTTCAAGTTTCCCAACAGCAAACAGAGGAAAACCGTCCCATGGAAGAGTGA 681 0.4552 MDAYLHIVRRTHHHHQTTDPKYIGSPSSPLASLVTRLQSPPSKVVRAVTVLLLSTRKRSLLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHGKDMTQDSTFEFERKRNRPERYDRSLAEDVLKAIPKIDKIRVGREERHHKNRMKGNKAKLLKEAARELEQGINLVKAPSVLQHDPSLTLPKIKVQVSQQQTEENRPMEE 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g1917 226 Pfam Ribosomal protein L24e 62 123 IPR000988 -
Alju10g1917 226 FunFam probable ribosome biogenesis protein RLP24 59 125 - -
Alju10g1917 226 Gene3D Ribosomal protein L24e 61 126 IPR038630 -
Alju10g1917 226 SMART 4TRASH 64 102 IPR011017 -
Alju10g1917 226 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 62 114 - -
Alju10g1917 226 Coils Coil 167 187 - -
Alju10g1917 226 ProSitePatterns Ribosomal protein L24e signature. 66 83 IPR023442 -
Alju10g1917 226 CDD Ribosomal_L24e_L24 62 112 IPR000988 -
Alju10g1917 226 PANTHER 60S RIBOSOMAL PROTEIN L24 61 225 IPR000988 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g1917 Alju-ChrAlju10 37204681 37207329 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g1917 61 226 Cytoplasmic Ribosomal Protein Gene Family AT2G44860 66.265 3.87e-79 233