Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g1916 ATGAGATTGGAGAAATGCTGGTTTTGCTCTTCAACCATATACCCTGGGCATGGAATCCAGTTTGCTCGTAATGATGCAAAGGAACCTTTCTATGATGCTATCATATTCAAGCTATGCTCCAACCAATTTCTAATTGTGCCACTTCTTGTCTTGGCTGTGCTCCAATCTGTTGTTGCCGTTGTCGTGCTACAGCAATCCTACTGGTTTAGAATGAGCTTGCTGTTAAGATTAAGGAGTCATATACCCAATGGGTTCTATAGACAATCTCTTGGTTTGACTGCTATAGGGCTTAATCTGAGTAATTTGAATGTCCATCCAAGATATTTTGGTCAACCTGCGAGGAAAGAGGAGGATAATGATGTAGAGGAAGTGGAAATTGACCAAAGAAGGCTCCCAGCTGATTTTGATCCCGCAACATTTGATCCTACTGAGCATCGGAGTCCTCCATCAGATAGAATTTTCAGGCTCGTTGATGAATTGGCGTCTCTAACACTAGCTGAATCTGCAGAATTGGGTCCCATTCTGATGAAAAAAATGGGACTAAAGGAGATGCCGACTGTGGGATATATGAAAGCTGGTGCTGCTGCTAATTTGGCTGGAATGGCAGCGAAGGCGCCTACTGCGGCCAAAGAGGAAAAGAAGCAAGAGAAGACAGTATTTGAACTAAAACTGGAATCCTATGAAGCAGCTTCAAAAATCAAAATCATCAAAGAAGTCAGGGGTTTTACAGATTTAGGTCTGAAGGAAGCAAAGGATTTAGTGGAGAAAACACCGTCCATTATAAAGAAAGGAGTTTCGAAGGAAGAAGGAGAACAGATAATAGAGAAAATGAAAGCTCTTGGAGCGAAGGTTGTCATGGAGTGA 864 0.4225 MRLEKCWFCSSTIYPGHGIQFARNDAKEPFYDAIIFKLCSNQFLIVPLLVLAVLQSVVAVVVLQQSYWFRMSLLLRLRSHIPNGFYRQSLGLTAIGLNLSNLNVHPRYFGQPARKEEDNDVEEVEIDQRRLPADFDPATFDPTEHRSPPSDRIFRLVDELASLTLAESAELGPILMKKMGLKEMPTVGYMKAGAAANLAGMAAKAPTAAKEEKKQEKTVFELKLESYEAASKIKIIKEVRGFTDLGLKEAKDLVEKTPSIIKKGVSKEEGEQIIEKMKALGAKVVME 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g1916 287 FunFam 50S ribosomal protein L7/L12 216 287 - -
Alju10g1916 287 ProSitePatterns Ribosomal protein L24e signature. 8 25 IPR023442 -
Alju10g1916 287 Gene3D Ribosomal protein L24e 1 43 IPR038630 -
Alju10g1916 287 Gene3D - 213 286 IPR014719 -
Alju10g1916 287 Coils Coil 210 230 - -
Alju10g1916 287 Pfam Ribosomal protein L24e 1 28 IPR000988 -
Alju10g1916 287 CDD Ribosomal_L7_L12 152 286 IPR000206 GO:0003735|GO:0005840|GO:0006412
Alju10g1916 287 PANTHER 39S RIBOSOMAL PROTEIN L12 114 287 IPR000206 GO:0003735|GO:0005840|GO:0006412
Alju10g1916 287 SUPERFAMILY ClpS-like 220 286 IPR014719 -
Alju10g1916 287 SUPERFAMILY Ribosomal protein L7/12, oligomerisation (N-terminal) domain 155 196 IPR036235 GO:0003735|GO:0005840|GO:0006412
Alju10g1916 287 Hamap 50S ribosomal protein L7/L12 [rplL]. 150 287 IPR000206 GO:0003735|GO:0005840|GO:0006412
Alju10g1916 287 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 4 30 - -
Alju10g1916 287 Pfam Ribosomal protein L7/L12 C-terminal domain 220 285 IPR013823 GO:0003735|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g1916 Alju-ChrAlju10 37193096 37196182 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g1916 1 42 Cytoplasmic Ribosomal Protein Gene Family AT2G44860 69.048 3.96e-15 69.7