Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g1882 ATGGTGCTCAGCCATACAGAAGGAAGCACGGTTGAATCTTTTCATGTTTCTGACTTTGGAGCCTTTGATCAATCAGTTAGATATCGTTTAGATGATGCTGTTAACTTGACTGGAGACCAAGTTTATCACTCACTCAAAGTAAGTAGCCAAACAAATTCTCTTGGTTCCACTCCTGTTGGTAATTTTGATAAGTTTCCAACTTCACTTGATATAAACAAATTCACTAAGCAATCAGAGCCCCAAGTGCCGCAGTTGCAAAAGGTCCAACCGTCAAATTTGGTAACCATATCAGTTGGTAATACAGAAAACCAAGTGTCTGCCATGGCTGATGTCAGTCCAAGGACGGATATTTCTACAGATGCTGATACTGATGAAAAGAATGGGCAGTTTGATAGAAGTCTGTCCAATGCTGCTGTTGCTTCTGATTCCAGTGACAGATCAAAGGATAAGTTAGATCAAAAGACTCTCCGCAGGCTTGCTCAGAATCGGGAGGCTGCAAGAAAAAGCAGGTTGAGAAAAAAGGCCTATGTCCAGCAGTTAGAAAGTAGTCGGTTGAAGTTGACCCAACTAGAGCAAGAGCTTCAGCGAGCTAGACAGCAGGGAATCTTCATATCAAGCTCAGGCGACCAGGCACATTCAATGGGTGGAAATGGGGCGATGGCATTTGATGTAGAATATTCTAGGTGGCTAGAAGAGCAGAATCGACAAATTAATGAGCTAAGAGCTGCTGTAAACTCCCATGCAAGTGATACAGAACTTCGCATGATTATTGATGGTATATTGGCACATTATGACGAGATTTTTAAGCTGAAGGGCTCTGCTGCTAAGAATGATGTTTTCCATTTGTTGTCTGGCATGTGGAAAACACCTGCTGAGAGATGTTTTCTATGGCTTGGTGGTTTTCGGTCATCCGAACTCCTCAAGCTTTTGGTGAATCAACTGGAACCTCTTACCGAGCAGCAGTTGGTCGGTATTACAAACTTGCAGCAATCATCTCAACAGGCTGAAGATGCCTTATCACAGGGCATGGAAGCATTGCAGCAGTCTTTAGCTGAAACACTGTCCAGTGGATCCCTTGGTTCATCTGGTTCATCAGGGAATGTGGCAAATTACATGGGCCAAATGGCTATGGCCATGGGTAAACTAGGAACCCTTGAGGGCTTTATTCGACAGGCTGACAATCTGAGGCAGCAAACACTACAACAAATGCACCGAATACTGACAACTCGTCAGTCGGCTCGTGCGTTGCTTGCTATACATGATTATTTCTCTCGGCTGCGTGCTCTAAGTTCCCTCTGGCTGGCTCGGCCGAGAGATTGA 1320 0.4455 MVLSHTEGSTVESFHVSDFGAFDQSVRYRLDDAVNLTGDQVYHSLKVSSQTNSLGSTPVGNFDKFPTSLDINKFTKQSEPQVPQLQKVQPSNLVTISVGNTENQVSAMADVSPRTDISTDADTDEKNGQFDRSLSNAAVASDSSDRSKDKLDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGIFISSSGDQAHSMGGNGAMAFDVEYSRWLEEQNRQINELRAAVNSHASDTELRMIIDGILAHYDEIFKLKGSAAKNDVFHLLSGMWKTPAERCFLWLGGFRSSELLKLLVNQLEPLTEQQLVGITNLQQSSQQAEDALSQGMEALQQSLAETLSSGSLGSSGSSGNVANYMGQMAMAMGKLGTLEGFIRQADNLRQQTLQQMHRILTTRQSARALLAIHDYFSRLRALSSLWLARPRD 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g1882 439 Coils Coil 173 200 - -
Alju10g1882 439 SMART brlzneu 150 213 IPR004827 GO:0003700|GO:0006355
Alju10g1882 439 MobiDBLite consensus disorder prediction 108 153 - -
Alju10g1882 439 Coils Coil 230 250 - -
Alju10g1882 439 FunFam BZIP family transcription factor 153 202 - -
Alju10g1882 439 Pfam Seed dormancy control 236 311 IPR025422 GO:0006351|GO:0043565
Alju10g1882 439 CDD bZIP_HBP1b-like 154 206 - -
Alju10g1882 439 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 157 172 IPR004827 GO:0003700|GO:0006355
Alju10g1882 439 ProSiteProfiles DOG1 domain profile. 219 436 IPR025422 GO:0006351|GO:0043565
Alju10g1882 439 PANTHER TRANSCRIPTION FACTOR TGA9 93 438 - -
Alju10g1882 439 Pfam bZIP transcription factor 154 194 IPR004827 GO:0003700|GO:0006355
Alju10g1882 439 Gene3D - 153 205 - -
Alju10g1882 439 SUPERFAMILY Leucine zipper domain 154 197 IPR046347 GO:0003700|GO:0006355
Alju10g1882 439 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 152 196 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g1882 Alju-ChrAlju10 36628532 36639231 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g1882 108 439 bZIP Transcription Factor Family AT3G12250 81.627 0.0 538
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Alju10g1882 DOG1 2.7e-32 No_clan