Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g1861 ATGAAAACAATATTTCATCACAATATGAAAACTTCGGGCGTCGCAGTTCTTGAGGAAGTGGAAGGAGTTTTATCCCCTGAAGAAGATGATGCTGATTCTGAGTTCGTGGAGATTGACCGCACTGGTCGATATGGTCGGTACAAGGAGGATTTGGGGCAAGGTGCTTTCAAGAAGGTATATAGAGCATTTGATGAGTTGGCAGGAATTGAAGTAGCTTGGAATCAGGTTAAGGTGGCAGATTTATTGCGTAATAATGAGGATTTGGAGCCCCTATATTCAGAAGTGCATTTGCTGAAGACTTTGAAGCATAAAAATATAATTAAATTTTACAATTCATGGGTCGATACAAAGAATGAGAACATCAACTTCATCATTGAAATTTTCACTTCTGGAACGTTATGCCATCATGATCCGCCAGTTATTCATCGAGATTTAAAGTGTGACAATATTTTTGTCAATGGAAATCATAGTGAGGTTAAAATTAGTGACTTGGGATTGGTTGCGATACTTCAGCAAGCCAATTCAGCTCATAGTGTTATGGATACTCCGGAGTTTATGGCTCCCGAGCTTTATGAAGAAGAATACAATGAACTTGTTGACATCTATGCTTTTGGTTCTGATCGCGGCTAG 630 0.3921 MKTIFHHNMKTSGVAVLEEVEGVLSPEEDDADSEFVEIDRTGRYGRYKEDLGQGAFKKVYRAFDELAGIEVAWNQVKVADLLRNNEDLEPLYSEVHLLKTLKHKNIIKFYNSWVDTKNENINFIIEIFTSGTLCHHDPPVIHRDLKCDNIFVNGNHSEVKISDLGLVAILQQANSAHSVMDTPEFMAPELYEEEYNELVDIYAFGSDRG 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g1861 209 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Alju10g1861 209 SUPERFAMILY Protein kinase-like (PK-like) 40 205 IPR011009 -
Alju10g1861 209 ProSiteProfiles Protein kinase domain profile. 45 209 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju10g1861 209 Gene3D Transferase(Phosphotransferase) domain 1 123 206 - -
Alju10g1861 209 Pfam Protein kinase domain 132 205 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju10g1861 209 Gene3D Phosphorylase Kinase; domain 1 28 122 - -
Alju10g1861 209 FunFam Probable serine/threonine-protein kinase WNK1 29 126 - -
Alju10g1861 209 SMART serkin_6 45 207 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju10g1861 209 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 27 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g1861 Alju-ChrAlju10 36045488 36048018 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g1861 33 205 MAP Kinase Kinase Kinase AT5G58350 56.931 1.55e-76 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Alju10g1861 Pkinase 2.1e-17 CL0016