Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g1856 ATGAAAGTCCCCTGTTGTTCGGTTTGCCAAACGCGGTACAACGAGGAAGAGCGAGTCCCGCTTCTGCTCCAATGTGGGCATGGGTTTTGCAGAGAGTGTCTCTCAAGAATGTTCTCGGCGTCTCCAGATACGACGCTGGCGTGTCCGAGATGTCGCCATGTGTCCATCGTCGGGAACTCTGTGCAGGCTCTGCGCAAGAACTACGCCGTGCTGGCTCTTATTCACTCGGCTTCGAATGCGTCCGGTTCGAATTTTGATTGTGACTTCACAGATGATGAAGAAGAAGGGGGTGATGGTGGTGAAGAAGATGTAGACAAAGATGAGGACTCGGTCATTCGCCGCCGGTGTAGTCGCGGTTCCCAAACATCGAGCTCCGGCGGCTGTGGACCGGTTTTAGAGGTTGGAGTGCACCAGGAGTTGAAACTTCTGCGCCGACTAGGAGAGGGGAGGAGGGCTGGTATGGAAATGTGGACAGCGGTGATTGGTGGTGGAAATGGTCGGTGCCGACATCAAGTGGCGGTGAAGAAGGTTACGGTAGTGGATGAGATGGATTTGGATTGGATGCAGGGGCAGCTTGAGACTCTGCGTCGTGCTTCAATGTGGTGTAGGAATGTATGTACATTTCATGGAGCAATGAGGATGGAGGAAAGTTTGTGTCTTGTAATGGACCGGTGTTATGGATCAGTTCAGTCGGAGATGCAGCGTAACGAAGGCAGACTTACTCTGGATCAAGTCTTAAGATATGGAGCAGACATTGCTAGAGGTGTGGCTGAACTTCATGCTGCTGGTATTGTTTGCATGAATCTCAAACCATCCAATCTTCTTCTTGATGCAAATGGTCGAGCAGTGATTTCAGATTATGGACTTGCTACAATTTTGAAGAAGCCTTCCTGTCGGAAGGCCAGGGCAGAATGTGATAACTCCTCAAAGATCCATTCATGTATGGAGTGTATAATGCTCAGTCCACATTACACAGCTCCAGAGGCTTGGGAACCTGTGAAGAAGTCGTTAAACTTGTTCTGGGATGATGCAATAGGTATATCTGCAGAGTCGGATGCCTGGAGTTTTGGTTGTACATTGGTGGAAATGTGCACGGGTTCTGTTCCCTGGTCTGGTTTAAGTGCAGAAGAAATCTATCGAGCAGTTGTCAAGGGAAAGAAACTGCCACCGCAGTATGCTAGTGTGGTTGGGGGTGGAATACCAAGGGAATTGTGGAAGATGATTGGAGAGTGCTTGCAGTTTAAACCAGCCAAAAGGCCTAGTTTTAATGCAATGTTAGCTATATTTCTTCGTCATTTGCAGGAAATACCACGCAGCCCTCCTGCAAGCCCTGATAATGACTTTGTTCAATCATCTGTGTCAAATGCGGTTGAGCCTTCCCCGCTACCTGAGCCAGAAGTTCCACGAGAAAACCCAAACCATCTTCATCGATTTGTGTCTGAAGGGGATGTTAGAGGTGTTAGAGTTCTTCTTGCAAAGGCTGCATCAGAAAATGGTAGCAATTACCTATCTTCTTTATTGGAAGCTCAAAATGCTGATGGACAAACTGCTCTTCATCTGGCTTGTAGACGGGGTAGTGCAGAACTTGTTGAAGCTATTTTGGAGTACAAAGAGGCAAATGTAGATGTCTTGGACAAAGATGGAGATCCTCCTCTTGTTTTTGCATTAGCAGCTGGATCTCCAGAATGTGTCCATAGTCTTATAAAAAGAAATGCTAATGTAAGGTCTCAGTTGAGAGATGGCTTTGGCCCTTCTGTTGCCCATGTTTGTGCTTATCATGGACAGCCAGATTGCATGCGAGAATTACTGTTGGCTGGAGCGGATCCTAATGCAGTGGATGATGAAGGAGAAACCGTACTGCATCGTGCAGTTTCCAAGAAGTACACAGACTGTGCCCTTGTGATATTGGAAAATGGAGGCTGCAGATCAATGGGCATCTTAAATTCGAAGAATCTGACACCACTGCACTTGTCTGTGGCAACGTGGAATGTGGCTGTTGTAAAAAGATGGGTTGAAGTTGCAACTCCTAATGAGATTGCTGAGGCAATTGACATTCCAAACCCTATTGGCACTGCACTGTGCATGGCGGCTGCTTCTAAAAAAGACCATGAAATTGAGGGCAGAGAATTGGTGCAGATACTGCTTGCTGCAGGAGCAGATCCATCTGCTCAGGATACACAGAATGGACGGACAGCCCTGCATACAGCGGCTATGACTAATGATGTTGAGTTGGTCAAGGTTATTCTTGCTGCTGGTGTTGATGTGAACATCCGTAATGTGCACAACAGTATACCTCTTCACTTAGCACTAGCTAGGGGGGCAAAGTCATGTGTTGGATTGCTTCTATCTGCTGGGGCTGATTATAATTTGCAGGATGATGATGGTGACAATTCTTTCCACATAGCAGCAGAGACCGCAAAAATGATTCGTGAAAATCTTGCTTGGCTCATTGTGATGCTAAGAAATCCTGATGCTGATGTTGAAGTGAGAAACCACAGTGGCAAGACCCTACGTGATATCTTAGAGGCACTTCCTCGAGAATGGATATCTGAAGATCTGATGGAGGCACTAGCCAATAGAGGTGTTCATCTATCTTCTACAATATTTGAAGTGGGAGATTGGGTGAAGTTTAAAAGAACTGTTGCAACTCCAACATATGGGTGGCAGGGTGCTAGACAAACGAGTGTTGGCTTTGTGCAAAGTGTTCCTGATAGGGAGAATCTCATTGTCTCCTTTTGTTCCGGAGAGGCTCGTGTTTTAGCAAGTGAAGTTGTAAAAGTCATTCCATTAGACAGGGGCCAACATGTACAGCTCAAAGCCGATGTGAAAGAGCCCAGGTTTGGTTGGCGTGGACAGTCACGCGACAGCATCGGGACAGTTTTATGCGTTGATGATGATGGGATCCTCCGTGTAGGGTTTCCTGGAGCATCCAGAGGGTGGAAAGCTGACCCATCCGAGATGGAACGGGTTGAGGAATTCAAGGTTGGAGACTGGGTTCGTATTCGCCCCACTCTTACATCTGCAAAGCATGGATTAGGGTCTGTGACACCCGGAAGCATTGGAATAGTATATTGTATTAGGCCAGACAGTAGTCTCTTGATTGAACTGAGCTATCTGCCAAATCCATGGCATTGTGAACCAGAAGAGGTTGAGCATGTTGCTCCTTTTAGGATAGGTGATCGGGTTTGTGTGAAGCGATCTGTTGCGGAACCTAGATATGCTTGGGGTGGTGAGACACATCATAGTGTAGGAAGAATAAGCGAGATAGAGAATGATGGTTTATTAATAATGGATATACCAAATCGGCCCATACCATGGCAGGCTGATCCATCTGACATGGAGAAGGTGGAAGATTTCAAGGTTGGAGATTGGGTCAGAGTGAAAGCTTCAGTGTCTTCTCCAAAGTATGGGTGGGAGGATGTTACAAAGAGCAGTATCGGGATAATTCATAGCTTGGAAGAGGATGGGGATATGGGTATTGCCTTTTGCTTCAGGAGTAAGCCTTTCTCTTGCTCTGTCACTGATGTGGAGAAGGTTCCTCCTTTTGAGGTGGGACAAGAGATTCATGTGATGCCATCTGTTACTCAGCCTCGCCTTGGATGGTCAAATGAATCACCAGCTTCTGTTGGAAAAATAGTGAGAATTGACATGGATGGTGCTCTAAATGTGAGAGTCACTGGTAGGCAGAGCTTGTGGAAAGTTTCTCCTGGAGATGCAGAACGACTTCCTAGATTTGAAGTTGGTGATTGGGTACGCTCAAAACCAAGCCTAGGAAACAGACCAAGTTATGACTGGAATAGTGTTGGAAAAGAAAGTATAGCTGTTGTGCATAGTGTACAGGATTCTGGATACTTGGAGTTGGCTTGCTGTTTTCGTAAAGGGAAGTGGATCACTCATTATACAGATGTTGAAAAGGTTCCTTGCTTTAAAGTTGGGCAGTATGTTAGGTTCAGAACCGGTTTGGTTGAACCAAGATGGGGCTGGAGAGGAGCTCATCCTGAATCACGAGGTGTTATAACTACTATACATGCCGATGGAGAAGTGAGGGTGGCATTCTCTGGTTTGCCTGGTTTGTGGAGAGGAGATCCTGTGGACCTTGAGATTGAGCACATGTTTGAAGTTGGAGAGTGGGTGAAGTTGAAAGATAATGCCGATGACTGGAAATCTGTTGGACCCGGTAGTGTTGGTCTTGTACAAGGCATAGGGTATGAAGGTGATCTATGGGATGGAAACAATCATGTTGGCTTTTGTGGGGAACAAGAAAGATGGGTAGGACCAACTTCCCATCTCGAAAGAGTTGAGAAACTCGTTGTTGGACAAAAGGTCATGGTTAAACAAACTGTAAAACAGCCAAGATTTGGGTGGTCTGGACACACCCATGCTAGTATTGGAACCATATCAGCCATTGATGCCGATGGGAAGCTTCGAATATACACTCCAGCAGGATCGAAAGCATGGATGCTGGACCCGGCAGAAGTAGATTTGGTAGAAGAGGAGGAGCTCCAGATTGGAGACTGGGTCAAGGTTAGAGCATCTGTTTCAACACCAACGCACCAGTGGGGAGAAGTGAACCATTCAAGCTTAGGGGTTGTGCATCGGATGGAAGATGATGATCTGTGGGTGGCATTCTGTTTCACTGAGAGGCTATGGCTTTGCAAGGCATGGGAGATGGAAAGAGTTAGACCATTTAGAGTTGGGGATAAAGTAAGAATCCGAGATGGATTGGTGGCGCCCCGGTGGGGATGGGGAATGGAGACACATGCTAGTAAGGGACAGGTGATTGGAGTAGATTCAAATGGTAAGCTAAGAATTAAGTTCCGATGGAGGGAAGGAAGGCCGTGGATAGGAGACCCTGCGGATATCGTTCTCGATGAGAACTGA 4881 0.4675 MKVPCCSVCQTRYNEEERVPLLLQCGHGFCRECLSRMFSASPDTTLACPRCRHVSIVGNSVQALRKNYAVLALIHSASNASGSNFDCDFTDDEEEGGDGGEEDVDKDEDSVIRRRCSRGSQTSSSGGCGPVLEVGVHQELKLLRRLGEGRRAGMEMWTAVIGGGNGRCRHQVAVKKVTVVDEMDLDWMQGQLETLRRASMWCRNVCTFHGAMRMEESLCLVMDRCYGSVQSEMQRNEGRLTLDQVLRYGADIARGVAELHAAGIVCMNLKPSNLLLDANGRAVISDYGLATILKKPSCRKARAECDNSSKIHSCMECIMLSPHYTAPEAWEPVKKSLNLFWDDAIGISAESDAWSFGCTLVEMCTGSVPWSGLSAEEIYRAVVKGKKLPPQYASVVGGGIPRELWKMIGECLQFKPAKRPSFNAMLAIFLRHLQEIPRSPPASPDNDFVQSSVSNAVEPSPLPEPEVPRENPNHLHRFVSEGDVRGVRVLLAKAASENGSNYLSSLLEAQNADGQTALHLACRRGSAELVEAILEYKEANVDVLDKDGDPPLVFALAAGSPECVHSLIKRNANVRSQLRDGFGPSVAHVCAYHGQPDCMRELLLAGADPNAVDDEGETVLHRAVSKKYTDCALVILENGGCRSMGILNSKNLTPLHLSVATWNVAVVKRWVEVATPNEIAEAIDIPNPIGTALCMAAASKKDHEIEGRELVQILLAAGADPSAQDTQNGRTALHTAAMTNDVELVKVILAAGVDVNIRNVHNSIPLHLALARGAKSCVGLLLSAGADYNLQDDDGDNSFHIAAETAKMIRENLAWLIVMLRNPDADVEVRNHSGKTLRDILEALPREWISEDLMEALANRGVHLSSTIFEVGDWVKFKRTVATPTYGWQGARQTSVGFVQSVPDRENLIVSFCSGEARVLASEVVKVIPLDRGQHVQLKADVKEPRFGWRGQSRDSIGTVLCVDDDGILRVGFPGASRGWKADPSEMERVEEFKVGDWVRIRPTLTSAKHGLGSVTPGSIGIVYCIRPDSSLLIELSYLPNPWHCEPEEVEHVAPFRIGDRVCVKRSVAEPRYAWGGETHHSVGRISEIENDGLLIMDIPNRPIPWQADPSDMEKVEDFKVGDWVRVKASVSSPKYGWEDVTKSSIGIIHSLEEDGDMGIAFCFRSKPFSCSVTDVEKVPPFEVGQEIHVMPSVTQPRLGWSNESPASVGKIVRIDMDGALNVRVTGRQSLWKVSPGDAERLPRFEVGDWVRSKPSLGNRPSYDWNSVGKESIAVVHSVQDSGYLELACCFRKGKWITHYTDVEKVPCFKVGQYVRFRTGLVEPRWGWRGAHPESRGVITTIHADGEVRVAFSGLPGLWRGDPVDLEIEHMFEVGEWVKLKDNADDWKSVGPGSVGLVQGIGYEGDLWDGNNHVGFCGEQERWVGPTSHLERVEKLVVGQKVMVKQTVKQPRFGWSGHTHASIGTISAIDADGKLRIYTPAGSKAWMLDPAEVDLVEEEELQIGDWVKVRASVSTPTHQWGEVNHSSLGVVHRMEDDDLWVAFCFTERLWLCKAWEMERVRPFRVGDKVRIRDGLVAPRWGWGMETHASKGQVIGVDSNGKLRIKFRWREGRPWIGDPADIVLDEN 1626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g1856 1626 ProSiteProfiles Ankyrin repeat region circular profile. 513 535 - -
Alju10g1856 1626 Pfam Ankyrin repeats (3 copies) 707 792 IPR002110 GO:0005515
Alju10g1856 1626 Pfam Ankyrin repeats (3 copies) 493 575 IPR002110 GO:0005515
Alju10g1856 1626 SUPERFAMILY Ankyrin repeat 503 836 IPR036770 -
Alju10g1856 1626 Gene3D - 645 767 IPR036770 -
Alju10g1856 1626 ProSiteProfiles Zinc finger RING-type profile. 6 52 IPR001841 -
Alju10g1856 1626 MobiDBLite consensus disorder prediction 90 126 - -
Alju10g1856 1626 Pfam Protein kinase domain 165 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju10g1856 1626 FunFam E3 ubiquitin-protein ligase KEG 453 683 - -
Alju10g1856 1626 Gene3D - 768 847 IPR036770 -
Alju10g1856 1626 FunFam E3 ubiquitin-protein ligase KEG 226 443 - -
Alju10g1856 1626 SMART ring_2 6 51 IPR001841 -
Alju10g1856 1626 Gene3D - 450 644 IPR036770 -
Alju10g1856 1626 PANTHER E3 UBIQUITIN-PROTEIN LIGASE KEG 1 1625 IPR044584 GO:0004842|GO:0006952|GO:0009738|GO:0016567
Alju10g1856 1626 PRINTS Ankyrin repeat signature 514 529 IPR002110 GO:0005515
Alju10g1856 1626 PRINTS Ankyrin repeat signature 710 724 IPR002110 GO:0005515
Alju10g1856 1626 MobiDBLite consensus disorder prediction 90 105 - -
Alju10g1856 1626 ProSiteProfiles Ankyrin repeat profile. 761 793 IPR002110 GO:0005515
Alju10g1856 1626 SUPERFAMILY RING/U-box 5 57 - -
Alju10g1856 1626 Pfam Mind bomb SH3 repeat domain 1119 1237 IPR040847 -
Alju10g1856 1626 Pfam Mind bomb SH3 repeat domain 1049 1113 IPR040847 -
Alju10g1856 1626 Pfam Mind bomb SH3 repeat domain 1501 1620 IPR040847 -
Alju10g1856 1626 Pfam Mind bomb SH3 repeat domain 869 987 IPR040847 -
Alju10g1856 1626 Pfam Mind bomb SH3 repeat domain 1245 1366 IPR040847 -
Alju10g1856 1626 Pfam Mind bomb SH3 repeat domain 1372 1493 IPR040847 -
Alju10g1856 1626 SUPERFAMILY Protein kinase-like (PK-like) 140 467 IPR011009 -
Alju10g1856 1626 ProSiteProfiles Ankyrin repeat profile. 513 546 IPR002110 GO:0005515
Alju10g1856 1626 CDD RING-HC_KEG-like 3 59 - -
Alju10g1856 1626 Pfam RING-type zinc-finger 6 49 IPR027370 -
Alju10g1856 1626 ProSiteProfiles Ankyrin repeat region circular profile. 728 759 - -
Alju10g1856 1626 ProSitePatterns Zinc finger RING-type signature. 25 34 IPR017907 -
Alju10g1856 1626 MobiDBLite consensus disorder prediction 444 458 - -
Alju10g1856 1626 ProSiteProfiles Ankyrin repeat region circular profile. 761 793 - -
Alju10g1856 1626 Pfam Ankyrin repeats (many copies) 585 632 IPR002110 GO:0005515
Alju10g1856 1626 ProSiteProfiles Ankyrin repeat profile. 582 614 IPR002110 GO:0005515
Alju10g1856 1626 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 84 IPR013083 -
Alju10g1856 1626 FunFam E3 ubiquitin-protein ligase KEG 727 860 - -
Alju10g1856 1626 ProSiteProfiles Ankyrin repeat profile. 728 760 IPR002110 GO:0005515
Alju10g1856 1626 MobiDBLite consensus disorder prediction 440 472 - -
Alju10g1856 1626 SMART ANK_2a 761 790 IPR002110 GO:0005515
Alju10g1856 1626 SMART ANK_2a 582 611 IPR002110 GO:0005515
Alju10g1856 1626 SMART ANK_2a 688 723 IPR002110 GO:0005515
Alju10g1856 1626 SMART ANK_2a 728 757 IPR002110 GO:0005515
Alju10g1856 1626 SMART ANK_2a 794 827 IPR002110 GO:0005515
Alju10g1856 1626 SMART ANK_2a 470 499 IPR002110 GO:0005515
Alju10g1856 1626 SMART ANK_2a 650 678 IPR002110 GO:0005515
Alju10g1856 1626 SMART ANK_2a 547 576 IPR002110 GO:0005515
Alju10g1856 1626 SMART ANK_2a 513 543 IPR002110 GO:0005515
Alju10g1856 1626 SMART ANK_2a 615 646 IPR002110 GO:0005515
Alju10g1856 1626 ProSiteProfiles Protein kinase domain profile. 140 430 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju10g1856 1626 Gene3D Transferase(Phosphotransferase) domain 1 138 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g1856 Alju-ChrAlju10 35862482 35875145 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g1856 148 461 MAP Kinase Kinase Kinase AT1G53570 25.153 1.16e-18 89.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-1 Alju10g1856 Pkinase 9.8e-31 CL0016