Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g1815 ATGAGCATGTTAGGCCTGCGAGACCTACTTCTCATAGCTCCAAATCCTTCTTCTCTTCACCCCCACCACCACCAGCAACAGCAGCAGCAACAACAACCACCTCAACAGGATCATTCAAACCTTCATCCTCTTCCTTCTTCTGCTTCTCTCAGTGTCGGTCTCGGAATTTTCCCTCTCCTCACTGCAACTCCTTGCGTTCCCAATGACCTCCCTCACGATTCCGCCGATCACAATCACCAGAATACGGCGAGCAATTCCAATTTCTGGAACCTCAAGATGTGTCCGGCGGAAGTTGCAAATTCTTCCAAGAAAGGAGTGATCGATGTAGAAGGTGAAGAGAATGGGATTTTTGGGGGTGATTTTAGGGTCTGTCAGGATTGTGGGAATCGCGCCAAGAAAGATTGTGGGTATAGACGATGTAGGACTTGCTGTAAGGGACGTGGCTACGATTGTAGCACTCATATCAAGAGCACGTGGGTCCCCGCCGCTCGCCGCCGTGAGCGCCAGATAACCGTTCTTGGTGCCGCCGGAGGCGGTGGTGGTGTTTCTGGGTCGCCTCCCGGTTCTAAGAGGCCTAGAGCGTTCGGTTCGTCACAGAATGCAGCTACCACTTCTCATAGTTCTGCTTCCAACGCTACTACGCCAAGAAGCTTAGATACTAGCTCTCGTCACCAAGATGCTAGCTTCAAACAGTCTTTACCAGGTCATGTTCGTGCCCCTGCAGTATTCAGGTGCCATAGAGTGTCAGCTATTGGTAATGGAGAAGATGAGTTTGCGTACATGGCCACAGTCCATATCAGTGGCCATGTTTTCAAGGGGTTTCTGTATGATCAAGGTGCTGATGGGAAAAGCACAATCCCGTGTGTTTCGGAACTTCAACTGGGAAATTATAGCAGTGAAAGGAATAGGGAATGTTCTTCTACAATTGGAGTTCTTCCAACTAGTAATGCCTACCCTGCTTCTGGCTGTTGA 972 0.4979 MSMLGLRDLLLIAPNPSSLHPHHHQQQQQQQQPPQQDHSNLHPLPSSASLSVGLGIFPLLTATPCVPNDLPHDSADHNHQNTASNSNFWNLKMCPAEVANSSKKGVIDVEGEENGIFGGDFRVCQDCGNRAKKDCGYRRCRTCCKGRGYDCSTHIKSTWVPAARRRERQITVLGAAGGGGGVSGSPPGSKRPRAFGSSQNAATTSHSSASNATTPRSLDTSSRHQDASFKQSLPGHVRAPAVFRCHRVSAIGNGEDEFAYMATVHISGHVFKGFLYDQGADGKSTIPCVSELQLGNYSSERNRECSSTIGVLPTSNAYPASGC 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g1815 323 NCBIfam LRP1 C-terminal domain 233 279 IPR006511 -
Alju10g1815 323 MobiDBLite consensus disorder prediction 192 229 - -
Alju10g1815 323 MobiDBLite consensus disorder prediction 19 45 - -
Alju10g1815 323 NCBIfam putative zinc finger domain, LRP1 type 123 165 IPR006510 -
Alju10g1815 323 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 25 307 IPR007818 GO:0003700|GO:0006355
Alju10g1815 323 Pfam Domain of unknown function (DUF702) 123 281 - -
Alju10g1815 323 MobiDBLite consensus disorder prediction 174 233 - -
Alju10g1815 323 MobiDBLite consensus disorder prediction 14 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g1815 Alju-ChrAlju10 34648209 34649542 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g1815 1 302 C2H2 Transcription Factor Family AT5G12330 41.693 1.44e-61 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Alju10g1815 DUF702 1.2e-56 No_clan