Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g1801 ATGCGGCCACAGATCTTGCCTTTCAATTTCGTTCCTCTCCGCTTCTGCATCGCGTCCTCCTGCACGGTGCTCTCTGCTCCAGCCATGGCTACTGCGAGGACTGTCAAGGATGCTTCGCCTCACGAGTTCATCAAGGCCTACGCGGCTCACTTGAAGAGATCCGGAAAGATGGAGCCTCCTGAGTGGATTGATATAGTAAAGACTGCAAGATTTAAAGAATTGGCTCCATATGATCCTGATTGGTACTATATTAGGGCTGCATCCATGGCCAGAAAAATCTACTTGAGGGGGGGCCTTGGTGTTGGTGCTTTCCAAAGGATCTATGGTGGGAGCAAGAGGAATGGTAGCCGTCCTCCTCATTTTTGTAAGAGCAGTGGTGCTATTGCTCGTCACATTCTTCATCAGTTGCAGAACATGAACATTATTGAGGCTGACCCCAATGGTGGCAGAAGAATCACTCCTAGTGGTCGGAGAGATCTTGACCAGGTCACTGGCCGGATAGTGGTTGCACCTTGA 516 0.5019 MRPQILPFNFVPLRFCIASSCTVLSAPAMATARTVKDASPHEFIKAYAAHLKRSGKMEPPEWIDIVKTARFKELAPYDPDWYYIRAASMARKIYLRGGLGVGAFQRIYGGSKRNGSRPPHFCKSSGAIARHILHQLQNMNIIEADPNGGRRITPSGRRDLDQVTGRIVVAP 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g1801 171 PANTHER 40S RIBOSOMAL PROTEIN S19 29 166 IPR001266 GO:0003735|GO:0005840|GO:0006412
Alju10g1801 171 SUPERFAMILY "Winged helix" DNA-binding domain 34 168 IPR036390 -
Alju10g1801 171 SMART Ribosomal_S19e_2 34 170 IPR001266 GO:0003735|GO:0005840|GO:0006412
Alju10g1801 171 ProSitePatterns Ribosomal protein S19e signature. 118 137 IPR018277 GO:0003735|GO:0005840|GO:0006412
Alju10g1801 171 Pfam Ribosomal protein S19e 34 168 IPR001266 GO:0003735|GO:0005840|GO:0006412
Alju10g1801 171 Gene3D - 15 170 IPR036388 -
Alju10g1801 171 FunFam 40S ribosomal protein S19 30 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g1801 Alju-ChrAlju10 34206361 34213507 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g1801 29 171 Cytoplasmic Ribosomal Protein Gene Family AT3G02080 80.420 1.07e-87 251