Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g1774 ATGAGGAAGAAGCTTGATACCCGTTTTCCTGCGGCTCGAATAAAGAAGATAATGCAAGCAGATGAAGATATTGGAAAAATAGCGCTAGCAGTGCCTGTTTTAGTCTCAAAAGCTCTAGAGCTATTTTTGCAAGATCTTTGTGACCATACCTATGACATAACTCTTCGTAGAGGAGCAAAGACTATGAGTGCATTGCATCTAAAGCATTGTGTACAAAACTACAATGTTTTTGATTTTCTGAGGGATGTCGTGAGCCAGGTTCCTGACTATGGTCATGGGTATGGGCATGGCCGTTCTGAATCTGGTGCTGATGACCGGGCTGTTTCTAAGAGAAGGAAAGCAGCTGGTTATAATTACAGTGACAGTGACGAGGAATCTAAGAGGAGCAAGATGCATGGGTTGAACCCCACAGGCAGTACTGGAAGGGGAAGAGGTCGAGGTAGACGAAGAGGTCGAGGCCAAGGTGCTCGAACTGTTGAAAGAGAAAACTATCATCAGGAGATTGAAACTGAGCCTTCCACCTTTGTTCAACACAGCAGCAACCATAATCCAAACACAAGTGTGATAGAAGAAAATGGTTCAGAGCCAAAGGAGTCACCAAAGGAGAATACTGCAGTTCCAGGTGAAGGATCTCAGTCTCTCACTAAGATTGATTTGAATTCCAACACAAATGAAGCTGTTGATAAAGATGCAAGCACAACAGTTCATGCCACTGTGCCTGAACCTGCAACTGAAACCAAGCTTGAAGAAATCTCGGGCTGGTCTATCTCTGACGTGGACAAGATGGTCATTGATTCTGTGCGGCTTGTGCAGCTTGGCAGACGATTAGAAGAGGAAGAGGAAGATTACGATGATGAAGGGTAA 864 0.4456 MRKKLDTRFPAARIKKIMQADEDIGKIALAVPVLVSKALELFLQDLCDHTYDITLRRGAKTMSALHLKHCVQNYNVFDFLRDVVSQVPDYGHGYGHGRSESGADDRAVSKRRKAAGYNYSDSDEESKRSKMHGLNPTGSTGRGRGRGRRRGRGQGARTVERENYHQEIETEPSTFVQHSSNHNPNTSVIEENGSEPKESPKENTAVPGEGSQSLTKIDLNSNTNEAVDKDASTTVHATVPEPATETKLEEISGWSISDVDKMVIDSVRLVQLGRRLEEEEEDYDDEG 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g1774 287 Gene3D Histone, subunit A 1 86 IPR009072 GO:0046982
Alju10g1774 287 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 7 120 - -
Alju10g1774 287 MobiDBLite consensus disorder prediction 169 193 - -
Alju10g1774 287 MobiDBLite consensus disorder prediction 98 131 - -
Alju10g1774 287 MobiDBLite consensus disorder prediction 92 247 - -
Alju10g1774 287 MobiDBLite consensus disorder prediction 205 231 - -
Alju10g1774 287 SUPERFAMILY Histone-fold 4 88 IPR009072 GO:0046982
Alju10g1774 287 FunFam dr1-associated corepressor homolog 1 86 - -
Alju10g1774 287 MobiDBLite consensus disorder prediction 153 168 - -
Alju10g1774 287 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 8 71 IPR003958 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g1774 Alju-ChrAlju10 32236201 32244924 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g1774 1 276 CCAAT-HAP5 Transcription Factor Family AT3G12480 48.772 1.78e-75 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Alju10g1774 CBFD_NFYB_HMF 2.2e-18 CL0012
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju10g1774 10 32236201 32244924 Alju10g1774 10 32236201 32244924 ECH