Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g1754 ATGACACACAAATCCTCGTTTCTTCTCTCATCCTTCTTCTACTTTCTCTCCTTAGTTATCGCAGCCCATCATGCTAAAAGCTTTAGCTCAATTGTACTAAATCCATCTCCAAGACAATCACTACAAGAAAGCAGTGTTTTTCTTGCGGAACAAAACACAGAGCCGCCTGATTATCGGTATGCGTGTCTGGACCAAAGTGGCGTGGCTCCATCAAGCAAATACCAAAGCAATCTCAAGAGTCTCATATCCTCACTTTCTTCTGATGCTGCAACCAGCAATGGATTTGGTAACAGAACTGAAGGTAGTGATGAAGAAGATATGGTGTATGGGCTTTATCTTTGTAGAGGGGATGTGAATTCAAGTGTGTGTCATTCTTGTGTTGAAGATTCTAGCAGATTGATCCAACAACATTGTCCCAACAACGCTACTGCAGTTTTATGGTACCCATTTTGCCTTCTCAGGTACTCAAACCAGGATTTCTTTGGCAATCTAACGCTAAGGCCTCGGATTCCCATGTTTGATGCATCGCAAAACTTCTCGAGTGCTGGAGAGTTTGACAGTGATGCTAGGATTCTGATGAACGGTTTGATACAGACAGGTTCAGAGACAAACTTAATGTTTGGGACACATGTGTTCAACATAAATGGTACCCAGAAAAGGTATGGTTGGGTTCAATGCAGCAGAGACATAACCAGTGAAGAGTGCAGAACATGTCTAAGCAATATGCTTGAAGATGTTGTGAATTGTTGTGAAGGCAAGAGGGTTTGGAGAATCTTTTCTCCTAGTTGTATTGTCATGTATGAGACTCAGCCTTTCTTTGTAAATGACACTGGGTTGATTGCTCCAACATCCCAGCCAGGTGAGGAAAGTAGTAACAGGACAATGCTTATAGTTATCCTCGTTATAAGTGGAGTAGTAGTACTCACTCTATTGGTTTTCTGCACAATCTACTTCAGGTTCTTGAGAAAGAAAAAAGACAAACTAGCACTGCAGGAAGATGGGCTAAATCCAGTATTTTATCAAGATCAAACTGACGAAGAGAATAATATGAGTGCCGACCTTCCTACGATGTCCCTGAAAACTATTCTTGAAACTACTTGTAACTTTTCTGATGAATATAAATTGGGACAAGGTGGATTTGGCTCTGTTTACAAGGGTGTTTTACCTGATGGGAAGGAAATAGCAGTAAAAAGGCTGTCAAAAACTTCAGGGCAAGGATCAAAAGAGTTCAAGAATGAAGTGATATTGATTGCAAAATTGCAGCATCGGAACCTTGTGAGATTGTTAGCTTGCTGCATTGAGCAAAATGAAAAGCTACTTGTTTATGAGCACATGCCTAATTCTAGCCTTGATTTTCACCTATTCAGCATAGAGAAGCGTTCCAAGTTGGAATGGAAACTACGATTAAGCATCATTAATGGAATTGCAAAAGGGCTTTTATATCTCCATGAAGACTCTAGACTAAGGGTTATTCATAGGGATTTAAAAGCTAGTAATATATTATTAGACCACGACATGAATCCCAAAATTTCAGATTTTGGATTAGCTAAAGTTTTTGGAGACAACCAAAGACAGGCAAATACTATTAGAATTGTTGGTACCTATGGTTATATGACTCCAGAATATGCTATGGAAGGCTTGTTTTCAGTAAAATCCGATGTTTTCAGCTATGGTGTTCTTTTACTCGAAATCATTAGTGGGAAAAGGAATAGTGGATTTTATCTTTCAGAACATGGTCAAAGCCTTCTCGTATATGCTTGGAGGCTCTGGTGTGAAGGGAAGGGCTTGGACCTGATGGATCCAATATAA 1809 0.398 MTHKSSFLLSSFFYFLSLVIAAHHAKSFSSIVLNPSPRQSLQESSVFLAEQNTEPPDYRYACLDQSGVAPSSKYQSNLKSLISSLSSDAATSNGFGNRTEGSDEEDMVYGLYLCRGDVNSSVCHSCVEDSSRLIQQHCPNNATAVLWYPFCLLRYSNQDFFGNLTLRPRIPMFDASQNFSSAGEFDSDARILMNGLIQTGSETNLMFGTHVFNINGTQKRYGWVQCSRDITSEECRTCLSNMLEDVVNCCEGKRVWRIFSPSCIVMYETQPFFVNDTGLIAPTSQPGEESSNRTMLIVILVISGVVVLTLLVFCTIYFRFLRKKKDKLALQEDGLNPVFYQDQTDEENNMSADLPTMSLKTILETTCNFSDEYKLGQGGFGSVYKGVLPDGKEIAVKRLSKTSGQGSKEFKNEVILIAKLQHRNLVRLLACCIEQNEKLLVYEHMPNSSLDFHLFSIEKRSKLEWKLRLSIINGIAKGLLYLHEDSRLRVIHRDLKASNILLDHDMNPKISDFGLAKVFGDNQRQANTIRIVGTYGYMTPEYAMEGLFSVKSDVFSYGVLLLEIISGKRNSGFYLSEHGQSLLVYAWRLWCEGKGLDLMDPI 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g1754 602 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 336 444 - -
Alju10g1754 602 Gene3D Transferase(Phosphotransferase) domain 1 445 602 - -
Alju10g1754 602 FunFam Lectin-domain containing receptor kinase A4.3 445 602 - -
Alju10g1754 602 FunFam Cysteine-rich receptor-like protein kinase 28 58 159 - -
Alju10g1754 602 Gene3D - 171 272 IPR038408 -
Alju10g1754 602 Gene3D - 57 160 IPR038408 -
Alju10g1754 602 Pfam Salt stress response/antifungal 177 269 IPR002902 -
Alju10g1754 602 Pfam Salt stress response/antifungal 68 158 IPR002902 -
Alju10g1754 602 CDD STKc_IRAK 375 569 - -
Alju10g1754 602 ProSiteProfiles Gnk2-homologous domain profile. 56 160 IPR002902 -
Alju10g1754 602 ProSitePatterns Protein kinases ATP-binding region signature. 375 397 IPR017441 GO:0005524
Alju10g1754 602 SMART serkin_6 369 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju10g1754 602 ProSiteProfiles Protein kinase domain profile. 369 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju10g1754 602 SUPERFAMILY Protein kinase-like (PK-like) 352 599 IPR011009 -
Alju10g1754 602 ProSitePatterns Serine/Threonine protein kinases active-site signature. 490 502 IPR008271 GO:0004672|GO:0006468
Alju10g1754 602 FunFam Cysteine-rich receptor-like protein kinase 10 170 272 - -
Alju10g1754 602 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 65 601 - -
Alju10g1754 602 Gene3D Phosphorylase Kinase; domain 1 334 444 - -
Alju10g1754 602 Pfam Protein kinase domain 370 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju10g1754 602 ProSiteProfiles Gnk2-homologous domain profile. 167 272 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g1754 Alju-ChrAlju10 31594603 31599113 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g1754 38 600 Receptor kinase-like Gene Family AT4G05200 41.166 3.23e-153 455
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Alju10g1754 Pkinase 3e-44 CL0016