Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g1745 ATGATGGAATCACCAAAACCCACTATTGCCATTCCTGGATTTCTGATGATCTTCTTCATAATCTTGATCAGTTTCATCAAAACAAGTACTTCTCTAGCACCAAATTACGTTGGAGATGACTGCCATAACAAAATCCCACAGACTCTTACTTCCTCATACAAAGCCAATCTTAACCAGCTCCTCTCATGGCTCTCCACCGATTCCGCCACAAGCAGAGGCTACAATCACGGCTCCGTTGGAAACACCACCAACTCCGCCATCTACGGCCTCTACGACTGCCGTGGTGATGACCCAGGATACCTCTGCCAGTTTTGTGTCTCAACTGCCACCAGAGAGCTTCTCCAACGCTGTCCCAATCAGCCTTCTGCTGCAATTTGGTACAGCTACTGCGTACTCCGATACTCAAACGAGAACTTCTTTGGGAAACTGACAATGAGTCCGTTGTGGTCTATGGAAGGAGCAAATAAGAAGGTGTCCGATCCGATGGAGTGGAAGAAAGCAGAGAGTTACATGCAGAGTCTGATTCGACAAGCGACAACGGAGGAGACGAAGGAATTAAGTGCATGGGGAGAATTTGATATGGGAGGTGGAAGAAGAAGGTATGGGTTGGTACAGTGTAGTAGAGACCTTGACAGAAAGAGTTGCAAGAAATGTTTGGAGGCTATTATGAATAACGCCACTCAATGTTGTGAGCAGAAGCAAGGATGGCAACTTGGGACGCCAAGTTGTATGATCAAATACAACGATTACATGTTTTATCAGCCACCCACTTCTGATCATAATCCTACGACATATACCAATGATGGAGCTGGCAAGTACAAATCATTGATCTTAAGCATTAGTTTATTAGTGGCAGTGGCAATATTAAGTTTTTTTATCTACTTATGGCGAAGGATGAAGAATAGAAAAGATGAACCACCATTGGAAGGCGCACCTATATTTTATGACTTGTCTAGAAGAGAGAGATCATTGAACACAGACCTTCCCACAATCCCTTTACATGTTATTCAACAGAGCACTCATCACTTTTCGGAAGATTCTAAATTGGGAGAAGGTGGATTTGGTACTGTTTATAAGGGAACATTGCCAGATGGGAAGGAAATTGCTGTTAAAAGACTCTCACAAGCATCAAGTCAAGGTTCAAAGGAGTTCAAAAATGAAGTGATATTCATAGCGAAATTGCAACATAGAAACCTTGTCAAACTCTTGGGTTGCTGCATAGAGAAAAATGAGAAGTTACTTGTATATGAGTACATGCCAAATTCTAGCCTTGACTTCCACCTTTTCGTTAGAGCATGA 1299 0.4273 MMESPKPTIAIPGFLMIFFIILISFIKTSTSLAPNYVGDDCHNKIPQTLTSSYKANLNQLLSWLSTDSATSRGYNHGSVGNTTNSAIYGLYDCRGDDPGYLCQFCVSTATRELLQRCPNQPSAAIWYSYCVLRYSNENFFGKLTMSPLWSMEGANKKVSDPMEWKKAESYMQSLIRQATTEETKELSAWGEFDMGGGRRRYGLVQCSRDLDRKSCKKCLEAIMNNATQCCEQKQGWQLGTPSCMIKYNDYMFYQPPTSDHNPTTYTNDGAGKYKSLILSISLLVAVAILSFFIYLWRRMKNRKDEPPLEGAPIFYDLSRRERSLNTDLPTIPLHVIQQSTHHFSEDSKLGEGGFGTVYKGTLPDGKEIAVKRLSQASSQGSKEFKNEVIFIAKLQHRNLVKLLGCCIEKNEKLLVYEYMPNSSLDFHLFVRA 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g1745 432 ProSitePatterns Protein kinases ATP-binding region signature. 349 371 IPR017441 GO:0005524
Alju10g1745 432 ProSiteProfiles Gnk2-homologous domain profile. 145 252 IPR002902 -
Alju10g1745 432 Pfam Salt stress response/antifungal 48 136 IPR002902 -
Alju10g1745 432 Pfam Salt stress response/antifungal 166 250 IPR002902 -
Alju10g1745 432 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 314 418 - -
Alju10g1745 432 SUPERFAMILY Protein kinase-like (PK-like) 323 431 IPR011009 -
Alju10g1745 432 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 47 429 - -
Alju10g1745 432 FunFam Cysteine-rich receptor-like protein kinase 28 37 138 - -
Alju10g1745 432 Gene3D Phosphorylase Kinase; domain 1 316 418 - -
Alju10g1745 432 ProSiteProfiles Gnk2-homologous domain profile. 35 139 IPR002902 -
Alju10g1745 432 Pfam Protein tyrosine and serine/threonine kinase 346 428 IPR001245 GO:0004672|GO:0006468
Alju10g1745 432 ProSiteProfiles Protein kinase domain profile. 343 432 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju10g1745 432 Gene3D - 36 139 IPR038408 -
Alju10g1745 432 Gene3D - 152 252 IPR038408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g1745 Alju-ChrAlju10 30696504 30702146 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g1745 17 429 Receptor kinase-like Gene Family AT4G05200 34.884 1.92e-74 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Alju10g1745 PK_Tyr_Ser-Thr 6.6e-16 CL0016