Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g1736 ATGGAAGAGGTGAGTCGAATGACCAAAAGGATTGAAGATGAGGTTCTCCTCAAGGATCAGACTAGTTTACATTTAAATGATGAGAGTAATGGAAGAAGTGCAGGTGGAGTTGTTTTGAAGAAAGGGCCATGGACATCTGCTGAAGATGCTATCTTAGTGGACTATGTCAGAAAGCATGGAGAGGGCAACTGGAATGCTGTTCGGAAGTATTCAGGCCTGTCTCGCTGTGGAAAAAGCTGCCGGCTGCGATGGGTGAATCACCTAAGACCAAATCTAAAGAAAGGTGCATTTACTGCAGAAGAAGTGCAGCTCATTGCTGAACTGCATGCCAAGATGGGAAACAAATGGGCACGCATGGCTGCATATTTACCTGGTCGGACAGATAATGAGATCAAGAACTATTGGAATACCCGGATCAAGAGGCAACAACGAATTGGCTTGCCGCTTTATCCCCCTGATGTATGTTTGCACTCAAGGCAGCAAGCCCAACGCAGTGTTGGAATTGATGGTATTGAAAGAGGATATCGTGAATTGGTGTCAAAAAACATTGATGAGATACAAAATGCTATACCCAATAGCCTGAATGCTAGTCAGGAGTTCTTACCTTATGTGCCCAAGCTTCCTGATATATCTCCTAATAGCATTCTGCTGGAAGCTTATGCCTTATCTCCAAATTGTAATATTCTGCCATCAACTTTACCTTCCCATTACCAACTTGGAGGGTCAACAATGCCGTTTCTTGGTTCCAGCAGTATTAACAGAAACAGAACTTATCCATTTGACCATTTTTGGAATAATGTGTCATATATGATTGCACAATCATTTGGAGTGCATTCTCCTCTTGATCATGCAACTGATTTTGTAATCGAGTCTCCTTCCCAAACTAGTGCGCTGGAGCCAGATTGTTCTTCACCACATTATAGTGGTCTTCTGGATGATTTAATTCACCAGGCAAAGACTATAAGCAGTTCAAAGAATCATTATTTTCACAAGAGTTTAAGTTCATTAGGTACAATTCCTAGTGAGAAAGCAGACAGTTCAACATTGAACGTGTACAGTACAGAATGGGATGACTACATTGACCCTGTTTCTCCATTTGGCGCAACATCAATCTTAAATGAATTCCCTGCTGTTTGTGCTCATAAATCCTTCTTGGATGAACTACCGCCTGCACAGGCTTCAAGTGGTAAGTACTTCTCACTGTGGTCTGATGAAGGATGA 1221 0.4218 MEEVSRMTKRIEDEVLLKDQTSLHLNDESNGRSAGGVVLKKGPWTSAEDAILVDYVRKHGEGNWNAVRKYSGLSRCGKSCRLRWVNHLRPNLKKGAFTAEEVQLIAELHAKMGNKWARMAAYLPGRTDNEIKNYWNTRIKRQQRIGLPLYPPDVCLHSRQQAQRSVGIDGIERGYRELVSKNIDEIQNAIPNSLNASQEFLPYVPKLPDISPNSILLEAYALSPNCNILPSTLPSHYQLGGSTMPFLGSSSINRNRTYPFDHFWNNVSYMIAQSFGVHSPLDHATDFVIESPSQTSALEPDCSSPHYSGLLDDLIHQAKTISSSKNHYFHKSLSSLGTIPSEKADSSTLNVYSTEWDDYIDPVSPFGATSILNEFPAVCAHKSFLDELPPAQASSGKYFSLWSDEG 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g1736 406 Pfam Myb-like DNA-binding domain 41 88 IPR001005 -
Alju10g1736 406 Pfam Myb-like DNA-binding domain 94 137 IPR001005 -
Alju10g1736 406 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 89 143 IPR017930 -
Alju10g1736 406 SUPERFAMILY Homeodomain-like 40 135 IPR009057 -
Alju10g1736 406 ProSiteProfiles Myb-like domain profile. 39 88 IPR001005 -
Alju10g1736 406 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 36 88 IPR017930 -
Alju10g1736 406 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 26 370 - -
Alju10g1736 406 CDD SANT 43 88 IPR001005 -
Alju10g1736 406 ProSiteProfiles Myb-like domain profile. 89 139 IPR001005 -
Alju10g1736 406 CDD SANT 96 137 IPR001005 -
Alju10g1736 406 SMART sant 93 141 IPR001005 -
Alju10g1736 406 SMART sant 40 90 IPR001005 -
Alju10g1736 406 FunFam MYB-related transcription factor 40 93 - -
Alju10g1736 406 Gene3D - 40 93 - -
Alju10g1736 406 FunFam Transcription factor GAMYB 96 142 - -
Alju10g1736 406 Gene3D - 96 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g1736 Alju-ChrAlju10 30135164 30140497 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g1736 29 282 MYB Transcription Factor Family AT3G11440 51.341 1.08e-72 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Alju10g1736 Myb_DNA-binding 1.9e-14 CL0123