Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g1729 ATGAGTCCTTCCAAGACCAAGTTTTGCTTCTTTTGCTGCACACCACACAGAGTTCTCTGTCTTAGAACAAGGAATATTCAGATGGAATATGATGGTGACCATGGATCAGAAGTTTCTGATATAATACCCACTAATCAACAGAGAAGGAAACAGTCTTTTATTCGGAAAATTTTCACCATGAGGGAGAGAAATGGAGGAGAGGCTAGTGGAGTCTCGGTTGATACCCTTGAAGCACTATCTGACCCGTCCATCGAAAATCATTATTTTAGCTGCACAGAGCCTCCTATGTCTTCTGGTGAAGAAATTCAGAAATTAAGATTGTTTGTAGCAACATGGAATGTAGGAGGGCAATGTCCCAATGGGAACCTTGACCTGAGTGACTTTCTTCAGGTCAGAAATGAACCAGATATATATGTCTTGGGTTTTCAGGAAATCGTCCCCTTAAATGCAGGAAATGTGCTGGTATTAGAGGATAATGAGCCTGCTGCGAAATGGCTTGCTTTGATCAATCATTCATTGAATGGACCTTCTCATTTAGCTTCAAAGGGTCTAAAATACACAGCATCATTTGGTGGATCATTATTCTTTCAAAAGCCCACTTATAGGAAGCTTAAGAAGACATTGAGGACATTAGATGGAAAGAGGTTAAAAGGGTGTAACTGTGTTCTCGAAATGGAAAGGAAGGCTTCCAAAGAATTCTGTTTCCTCTGCCAAGAATCAAATGTAAACCTTGACGATTCTTCCTCAGAAGACGATAATGACAGTTACCAAACTTCCATTTCTTTGGCTTCTAGTAAGAATATGAAATACAGTCTTGTTGCGAGCAAGCAAATGGTGGGAATTTTCGTTTGTGTCTGGATGAAGAAGGAACTTGTTCAGCATGTTGGTCATTTGAGAGTATGTTGCACTAGTCGTGGGATCATGGGTTGCCTTGGAAACAAGGGTTGTATATCTGTGAGCATGTCATTGTACCAGACAACATTTTGCTTTATCTGTAGTCATTTGGCATCCGGAGAGAAAGAGGGTGATGAGCTTAGAAGAAACCTTGATGTTATAGAGATTTTAAAGAACACTCAGTTTCCGAGGATCTGCAAGACTTCATATAGTAGAATGTCCGAGAGAATTTTAGACCATGATCGGATCATATGGCTAGGGGACTTAAACTACCGAATTACTTTAAGCTATGATGATGCAAAAAGGCTTGTGGAAAGGAAGGATTGGCTTGCACTCTTTGACAAGGATCAGCTTCAGACAGAAAGGGAAGCAGGTCGCGTATTTAAGGGATGGAGAGAAGGGAAAATCTACTTTGCACCTACTTACAAATACCCCTTCAACTCAGACACTTACTATGCAGAATCTATCAAAGTTTCAAAAAACAAAAGAAGAACTCCGGCTTGGTGTGATAGAATTCTATGGCGTGGAAGGGGAATTCAGCAACGCTCGTACGAGCGAAAGGAATTGAAGTTTTCCGATCATCGGCCGGTTTGTGCAACATTTTTGGTACAAGTTGAGGCCATGTCAAGGAGGCTCAAGAAGAAGGTTCCTTCTTTCAATTTTCAGATTGAAGATCTTGTAACCACAACAAGAAGGGCATATTTTTCTTAA 1605 0.4069 MSPSKTKFCFFCCTPHRVLCLRTRNIQMEYDGDHGSEVSDIIPTNQQRRKQSFIRKIFTMRERNGGEASGVSVDTLEALSDPSIENHYFSCTEPPMSSGEEIQKLRLFVATWNVGGQCPNGNLDLSDFLQVRNEPDIYVLGFQEIVPLNAGNVLVLEDNEPAAKWLALINHSLNGPSHLASKGLKYTASFGGSLFFQKPTYRKLKKTLRTLDGKRLKGCNCVLEMERKASKEFCFLCQESNVNLDDSSSEDDNDSYQTSISLASSKNMKYSLVASKQMVGIFVCVWMKKELVQHVGHLRVCCTSRGIMGCLGNKGCISVSMSLYQTTFCFICSHLASGEKEGDELRRNLDVIEILKNTQFPRICKTSYSRMSERILDHDRIIWLGDLNYRITLSYDDAKRLVERKDWLALFDKDQLQTEREAGRVFKGWREGKIYFAPTYKYPFNSDTYYAESIKVSKNKRRTPAWCDRILWRGRGIQQRSYERKELKFSDHRPVCATFLVQVEAMSRRLKKKVPSFNFQIEDLVTTTRRAYFS 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g1729 534 SUPERFAMILY DNase I-like 89 518 IPR036691 -
Alju10g1729 534 Pfam Endonuclease/Exonuclease/phosphatase family 110 492 IPR005135 GO:0003824
Alju10g1729 534 SMART i5p_5 202 507 IPR000300 GO:0016791|GO:0046856
Alju10g1729 534 Gene3D Endonuclease/exonuclease/phosphatase 93 525 IPR036691 -
Alju10g1729 534 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 84 518 IPR045849 GO:0004445
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g1729 Alju-ChrAlju10 27263801 27269128 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g1729 273 513 Acyl Lipid Metabolism Gene Families AT1G65580 30.282 1.23e-32 131