Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g1724 ATGATACCCTCAAATATAATCAGGCAGCAAATTGTTATTCTGATCATGGATATAGATCTTAGGTTACCTTCTGGTGAGCATGATAAAGAGGATGAAGAGCCAAATACAATTGATAACTTATTGGATGGTGATGAAAAATTGCATAACGTAGACATAGAAGGAAGAAATATAGTTGATGCTGGTGTATCTGCTCTAGATGGCGGAGATTTGAATTCACCAACATTGGATATGGCAATATTTAAGGAAGATACAAATCTTGAACCACTTTCTGGCATGGAATTTGATTCTCACGGGGAAGCTTATTCTTTCTACCAAGAGTATGCTCGGTCAATGGGATTCAACACGGCAATTCAAAATAGTCGCCGTTCAAAAACATCAAGAGAATTTATAGATGCAAAGTTTGCTTGTTCCAGATATGGAACTAAACGGGAGTATGACAACAAATCATTCAGTCGACCACGAGCAAGACAGAATAAGCATGAGTTTGAAAATTCAACTGGCAGGAGATCTTGTTCAAAGACTGATTGTAAAGCAAGCATGCATGTAAAAAGAAGGTCAGATGGAAAATGGGTTATACATAGTTTTGTGAAGGAGCATAATCATGAGCTTTTACCAGCCCAAGCTGTCAGTGAACAAGCAAGGAAAATGTATGCTGCAATGGCTAGACAGTTTGCTGAATACAAAACTGTAGTTTGTCTAAAAAATGAGAAAAGTCCACTTGATAAAGGTCGGAATTTAGGCCTGGAGACTGGGGATGTCAAACTTCTGCTTGACTTCTTCATACAGATGCAAAACACGAATTCTAACTTCTTTTATGCTGTAGACATTGGTGAGGATCAACGGGTGAAAAGCCTTTTATGGCTTGACGCTAAATGTAGGCATGACTATATCAACTTTTGTGATGTAGTTTCTTTTGACACCACCTATGTGAGGAACAAATATAAGATGCCTCTTGCACTTTTTGTTGGAGTAAATCAGCATTATCAATTTATGTTGCTTGGGTGTGCCTTGATATCAGATGAAACTGCCACAACTTATTCTTGGCTGATGCAGACATGGCTGAAAGCAGTTGGGGGTCAAGTTCCTAAAGTGATAATTACTGACCATGACAAGACACTCAAGTCAGTGATTTCAGATGTATTCCCCCATGCTCATCATTGTTTGTGCCTATGGCACATATTGGGGAAGGTAACTGAAAATTTGGGTCATGTCATTAAACAACATGAGAATTTTATGGCAAAATTTGAAAAATGCATCCACAGGTCGTGGACAAGTGATGAGTTTGAGAAGAGGTGGTGGAAAATGGTTGATAGGTTTGAAGTCCGAGAGGATGATTGCTTGCAGACATTGTATGAAGATTGCAAGTTATGGGTGCCGACATTCATGAAGGATATATTCTTAGGGGGTATGTGTACCGTCCAGCGATCTGAAAGCTTAAATTCCTTCTTTGATAAATATGTTCACAAGAAAACCACTGTACAAGATTTTTTCAGACAGTATGAAACAATATTGCACGACAGGTATGAAGAGGAAGCAAAAGCAGATTCTGATACTTGGAATAAAGTGGCAGCGTTGAAAACTCCTTCACCTTTAGAGAAGAGTGTTGCTGGAATTTACACACATGCAGTATTTAAGAAGATTCAGGTTGAGGTTATTGGTGCAGTTGCTTGTCATCCTAAACCTGAAAGGCAGGATGATGCAAGCATTACCTACAAGGTTCATGATATGGAAAGGAATCAAGAATTCACAGTTGTGTTGAATGAACTAAAATCAGAGGTGTCTTGTATATGTCGGTTATTTGAATATAAAGGTTATCTTTGTCGACATGCATTGATTGTCCTACAATATTCTCGCCTTTCAGTAATTCCTTCTCAATACATTTTGAAAAGGTGGACGAGAGATGCAAAGTCAAGGCATTTACTTGTGGAACAATCAGATCATATGCTGGCTAGGGTGCAACGGTACAATGATTTAAGTCAGAGAGTACTTAAACTGAGTGAAGAGGGATCTCTATCTCAAGAGAGTTATAGTATTGCATTCCATGCTCTTCATGAGGCGTATTCAAGTTGTGTGAGTGTTAACAATTCCAGTAAAGATCCTCCAGAAGCAGTCACATCAGCTGGTCATGCTCAGCTTTCCCCTGAAGACGATACCCAGAGTAAAAATATGGGGAAGACAAACAGAAAGAAGAATCCAGCTAAAAAGAAAAAGTTGAACTCTGAGGCAGAAGTGATGACTGTTGGGGCTCAAGACAACTTGCAACAAATGGACAAGTTCAGCACTAGGGCTGTGACACTAGATGGTTATTATGGTGCTCAACAGAGCGTACAAGGAATGTTAAACTTGATGGGACCAACTCGTGATAATTACTATGGAAATCAACAGACTATTCAGGGCCTGGGACAAATAAGTTCAATACCACCAAGCCATGATGGTTATTATGGTGCTCATCAGAGCATGCCTGGTCTGGCACAACTGGATTTTTTCCGAGCATCAACAGGCTTTGCATATGGCATTCGGGATGATCCTAACGTAAGAGCAGCACAATTGCATGAAGATCCATCAAGACATGCATGA 2577 0.3958 MIPSNIIRQQIVILIMDIDLRLPSGEHDKEDEEPNTIDNLLDGDEKLHNVDIEGRNIVDAGVSALDGGDLNSPTLDMAIFKEDTNLEPLSGMEFDSHGEAYSFYQEYARSMGFNTAIQNSRRSKTSREFIDAKFACSRYGTKREYDNKSFSRPRARQNKHEFENSTGRRSCSKTDCKASMHVKRRSDGKWVIHSFVKEHNHELLPAQAVSEQARKMYAAMARQFAEYKTVVCLKNEKSPLDKGRNLGLETGDVKLLLDFFIQMQNTNSNFFYAVDIGEDQRVKSLLWLDAKCRHDYINFCDVVSFDTTYVRNKYKMPLALFVGVNQHYQFMLLGCALISDETATTYSWLMQTWLKAVGGQVPKVIITDHDKTLKSVISDVFPHAHHCLCLWHILGKVTENLGHVIKQHENFMAKFEKCIHRSWTSDEFEKRWWKMVDRFEVREDDCLQTLYEDCKLWVPTFMKDIFLGGMCTVQRSESLNSFFDKYVHKKTTVQDFFRQYETILHDRYEEEAKADSDTWNKVAALKTPSPLEKSVAGIYTHAVFKKIQVEVIGAVACHPKPERQDDASITYKVHDMERNQEFTVVLNELKSEVSCICRLFEYKGYLCRHALIVLQYSRLSVIPSQYILKRWTRDAKSRHLLVEQSDHMLARVQRYNDLSQRVLKLSEEGSLSQESYSIAFHALHEAYSSCVSVNNSSKDPPEAVTSAGHAQLSPEDDTQSKNMGKTNRKKNPAKKKKLNSEAEVMTVGAQDNLQQMDKFSTRAVTLDGYYGAQQSVQGMLNLMGPTRDNYYGNQQTIQGLGQISSIPPSHDGYYGAHQSMPGLAQLDFFRASTGFAYGIRDDPNVRAAQLHEDPSRHA 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g1724 858 MobiDBLite consensus disorder prediction 147 169 - -
Alju10g1724 858 Pfam MULE transposase domain 302 394 IPR018289 -
Alju10g1724 858 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 82 690 IPR031052 GO:0006355
Alju10g1724 858 Pfam FAR1 DNA-binding domain 102 205 IPR004330 -
Alju10g1724 858 SMART 26again6 593 620 IPR006564 GO:0008270
Alju10g1724 858 ProSiteProfiles Zinc finger SWIM-type profile. 582 618 IPR007527 GO:0008270
Alju10g1724 858 Pfam SWIM zinc finger 584 616 IPR007527 GO:0008270
Alju10g1724 858 MobiDBLite consensus disorder prediction 694 741 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g1724 Alju-ChrAlju10 27011948 27017315 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Alju10g1724 FAR1 6.2e-27 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju02g1465 02 12565639 12568889 Alju10g1724 10 27011948 27017315 CCT
Alju10g1724 10 27011948 27017315 Alju10g1724 10 27011948 27017315 ECH