Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g1713 ATGGAAGACTTCTATTGGAGCTATGATGAGGACGATATGGCTTCCGACGAAGTGTTTGAAGTTGGCGACTACGACAGTATCGACTCGGTCATGGCTGATTATAAGCGTTCCACAACTCTGGTGATCACAAGAGAATCACTCGTCACTGCGCAGAACGAAGATCTGCGGCGAGTAATGGAGATGCTTTCATCGAGAGAGCACCACGCTCGTACTCTTCTTATTCACCATCGTTGGGATGTGGAAAAGCTTTTTGCAGTATACGTAGAAAAGGGGAAAGCCGCCTTATTCGCAGAAGCCGGTCTTACTGTGTATGAATACTCCGGTTCAGGCTCATCATCATCAGTTCCTTCGTTTTCTTCTTCTTCTGTACTGTCTTGTGAAATCTGCATAGATAATGTTCCCAGCCATGAAGTAACAAGAATGGATTGTGGCCACTATTTCTGCAACGAATGTTGGACATCTCACTTTATCGTCCAGATTAACGAAGGTCAAAGCAAGCACATCACTTGTATGGCACACAAATGCAACGCCATTTGCGATGAACACGTTGTGAGAGATCTGGTTCGCAAAGAGCAACCGGAGACGGCCGAGAAGTTCGACCGGTTTCTTCTTGAATCCTATATTGAAGACAACAAGAGAGCCAAGTGGTGTCCTAGCGTTCCCCACTGTGGGAACGCAATACGTGTGGAGGAAGAAGAATTATGCGAGGTTGAATGTTACTGCGGCCTACAATTCTGCTTTAATTGCTCATTGGAGGCTCATTCGCCGTGTTCTTGTCCGATAGCTATGGTGGAACAAGTGTAG 804 0.4627 MEDFYWSYDEDDMASDEVFEVGDYDSIDSVMADYKRSTTLVITRESLVTAQNEDLRRVMEMLSSREHHARTLLIHHRWDVEKLFAVYVEKGKAALFAEAGLTVYEYSGSGSSSSVPSFSSSSVLSCEICIDNVPSHEVTRMDCGHYFCNECWTSHFIVQINEGQSKHITCMAHKCNAICDEHVVRDLVRKEQPETAEKFDRFLLESYIEDNKRAKWCPSVPHCGNAIRVEEEELCEVECYCGLQFCFNCSLEAHSPCSCPIAMVEQV 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g1713 267 SUPERFAMILY RING/U-box 197 261 - -
Alju10g1713 267 SUPERFAMILY RING/U-box 121 209 - -
Alju10g1713 267 CDD RING-HC_RBR_TRIAD1 126 177 - -
Alju10g1713 267 SMART ibrneu5 197 259 IPR002867 GO:0008270
Alju10g1713 267 ProSiteProfiles TRIAD supradomain profile. 122 267 IPR044066 -
Alju10g1713 267 FunFam RBR-type E3 ubiquitin transferase 120 211 - -
Alju10g1713 267 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 119 209 IPR013083 -
Alju10g1713 267 ProSiteProfiles Zinc finger RING-type profile. 126 174 IPR001841 -
Alju10g1713 267 Pfam IBR domain, a half RING-finger domain 197 259 IPR002867 GO:0008270
Alju10g1713 267 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 52 259 IPR031127 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g1713 Alju-ChrAlju10 26638987 26639790 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g1713 59 259 ARIADNE family AT2G16090 71.642 1.58e-98 295