Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g1709 ATGATGGAATCATCAAAACCCAACATCATTCCAGGATTTTCGATTATCTTCTTCATAGCTATAAGCTTCATCAGAACAAGTACTTCTCAGACGCCCAACTACGTTGGAGATGACTGCCATAACAAAACCCCACAAACTCTTACTTCCTCGTACAAAGCCAACCTTAACCAGCTACTCACAAGGCTGTCCGCCGATGCTTCCATGAGCAAACATTTCAGCAATACCATCATCGGAAACACCACTAACGCCATCGTGTATGGCCTATACGACTGCCGTGATGATGTTGCCGGATACTTCTGCCAGTTCTGTGTCACTACTGCTACCAGAGAGGTTCTCCAACGTTGCCCCAATCAATCTTCTGCTGTAATATGGTACAGCTATTGCATCCTGCGATACTCTAATGAGAACTATTTTGGGAAGGCGTCGATGACCCCGTTATGGTCAGGGGGAGGAGAGGAGAAGGTGTCAGATCCGACAGAGGGAAAGAAGGCGGAGAGTTTCATAAGGAGCCTGATCGAAGAAGCGACCGAGGAGGCAAAGAGGTTGAGCGCATGGGGAGAGTTTAGTTTAGGTGGTGGAAGAACAAGGTATGCGTTGGTACAGTGTAGTAAAGACCTTTCCAACGAGGGTTGCAGGCAGTGTTTGGAGGCTATGTTGAATAAAGCTATTCAATGCTGTGAGCAGAAGCAAGATTGGCAAGTTGGGTCGCCAAGTTGTATGATCAAGTACACTAATTACATGTTTTACCAGTCACCATCTTCCCATAATCCCAAGACAGCCAATAATGGAGTTAGCAAGTCAAAAGCCTTGATCATAAGCGCAAGTATATTAATGATTGTGGCTGTACTATGTTTTTCTTTCTACCTATTCAGGTGGAGAAAGAGTAGAAAAGATGAAACGCCGTCGGAGAGCACTCCTATAGTTTATGACCTTTCTCAAGGAGATAGTTCACTGAACACAGACCTTCCCACAATCCCTTTGCTTGTGATACAACAGAGCACCCAATACTTTTCAGAAGATTCCAAATTGGGAGAAGGTGGATTTGGTCCTGTTTATAAGGGAACACTACCAAATGGGAAAGAAATTGCTGTGAAAAGACTATCTCAAACTTCAGGTCAAGGTTCACAGGAGTTCATGAATGAAGTGATATTCATAGCAAAATTACAACATAGAAACCTTGTTAGACTCTTGGGCTTCTGCATAGAGGAAAATGAAAAGCTGCTTGTATTAGAGTACATGCCAAATTCTAGCCTTGACTCTCACCTTTTCGATGGTGAAAATAGAAAGAAACTTGATTGGACAAGAAGACTAAATATTATTAATGGAATTGCAAGAGGACTTTTGTATCTGCATGAAGACTCCAGACTTAGAGTCATTCATAGAGATTTGAAACCTAGCAATGTCCTTTTGGATTTTGAGATGAACCCTAAAATATCAGATTTTGGATTGGCAATGACTTTTGAAGGAGCACAAAATCAATGTAATACAAGACGAATAATGGGTACATATGGTTACATGGCTCCAGAATATGCTATGGAAGGATTATTTTCGGTGAAATCGGATGTTTTTAGTTTTGGAGTTCTTCTACTGGAAATTATATGTGGAAAAAAGATTAGCAACTTCTACCTCTCTGAACATGGTCAAAGTCTTCTATTTTATGCTTGGAATTCGTGGTGTGAAGGAAAATGTTTGGAACTAATGGACCCCATCCTAGAAGATTCATATATAGAAAATGAAGTTTTGAAGTGCATACATATTGCTTTGCTTTGTGTTCAAGAAGATGCAGCAGATAGGCCAACCATGTCTACTGTTGTCGTCATGCTTGCAAGTGACACATTGTCATTTCCCATGCCTAGTCGTCCTGCATTTTCAGTTGGAAGAATGGCCACAGAAAGTTTATCTACTTCAAAAAATTCTAAAGATGCTTCTATTAATGAGGTAACCTTATCATCCATCAAACCAAGGTGA 1968 0.4101 MMESSKPNIIPGFSIIFFIAISFIRTSTSQTPNYVGDDCHNKTPQTLTSSYKANLNQLLTRLSADASMSKHFSNTIIGNTTNAIVYGLYDCRDDVAGYFCQFCVTTATREVLQRCPNQSSAVIWYSYCILRYSNENYFGKASMTPLWSGGGEEKVSDPTEGKKAESFIRSLIEEATEEAKRLSAWGEFSLGGGRTRYALVQCSKDLSNEGCRQCLEAMLNKAIQCCEQKQDWQVGSPSCMIKYTNYMFYQSPSSHNPKTANNGVSKSKALIISASILMIVAVLCFSFYLFRWRKSRKDETPSESTPIVYDLSQGDSSLNTDLPTIPLLVIQQSTQYFSEDSKLGEGGFGPVYKGTLPNGKEIAVKRLSQTSGQGSQEFMNEVIFIAKLQHRNLVRLLGFCIEENEKLLVLEYMPNSSLDSHLFDGENRKKLDWTRRLNIINGIARGLLYLHEDSRLRVIHRDLKPSNVLLDFEMNPKISDFGLAMTFEGAQNQCNTRRIMGTYGYMAPEYAMEGLFSVKSDVFSFGVLLLEIICGKKISNFYLSEHGQSLLFYAWNSWCEGKCLELMDPILEDSYIENEVLKCIHIALLCVQEDAADRPTMSTVVVMLASDTLSFPMPSRPAFSVGRMATESLSTSKNSKDASINEVTLSSIKPR 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g1709 655 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 306 412 - -
Alju10g1709 655 FunFam cysteine-rich receptor-like protein kinase 10 413 615 - -
Alju10g1709 655 ProSiteProfiles Gnk2-homologous domain profile. 143 248 IPR002902 -
Alju10g1709 655 Pfam Salt stress response/antifungal 163 246 IPR002902 -
Alju10g1709 655 Pfam Salt stress response/antifungal 39 134 IPR002902 -
Alju10g1709 655 Gene3D - 33 137 IPR038408 -
Alju10g1709 655 Gene3D - 152 248 IPR038408 -
Alju10g1709 655 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 27 653 - -
Alju10g1709 655 Gene3D Phosphorylase Kinase; domain 1 308 412 - -
Alju10g1709 655 FunFam Cysteine-rich receptor-like protein kinase 28 35 136 - -
Alju10g1709 655 Pfam Protein tyrosine and serine/threonine kinase 340 607 IPR001245 GO:0004672|GO:0006468
Alju10g1709 655 SMART serkin_6 337 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju10g1709 655 Gene3D Transferase(Phosphotransferase) domain 1 413 614 - -
Alju10g1709 655 ProSiteProfiles Gnk2-homologous domain profile. 33 137 IPR002902 -
Alju10g1709 655 SUPERFAMILY Protein kinase-like (PK-like) 321 631 IPR011009 -
Alju10g1709 655 CDD STKc_IRAK 343 608 - -
Alju10g1709 655 ProSitePatterns Serine/Threonine protein kinases active-site signature. 458 470 IPR008271 GO:0004672|GO:0006468
Alju10g1709 655 ProSiteProfiles Protein kinase domain profile. 337 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g1709 Alju-ChrAlju10 26296262 26308496 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g1709 13 655 Receptor kinase-like Gene Family AT4G05200 41.272 1.70e-170 501
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Alju10g1709 PK_Tyr_Ser-Thr 8e-48 CL0016