Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g1688 ATGAAGCTCCGTCATCGTCATTCAAGTCATTCCTTCATAAAAACCCTAGCTGCCCGTCAATATCCACTGTCGCTGGATTTCTTCCCGCCTCACTCTGCCTCTCGGCCGCTGCAATTCCTATTAGGGTTCAATCTCAATGGTAAATCTTTCGCTTCAGAGAAGAAATTGTCTAACCCAATGAGGGAAATCAAAGTCCAGAAGCTAGTTCTCAACATCTCTGTTGGTGAGAGTGGAGACCGTCTCACCCGTGCTGCCAAGGTGCTTGAGCAACTCAGTGGCCAAACCCCAGTATTCTCGAAAGCAAGGTACACTGTTAGATCCTTTGGGATTAGAAGAAATGAAAAAATTGCATGCTATGTTACCGTCAGAGGTGACAAAGCAATGCAACTTTTGGAGAGTGGTCTGAAGGTGAAGGAATATGAGCTTCTAAGGCGAAACTTTAGTGATACTGGGTGTTTTGGCTTTGGTATTCAGGAGCACATTGACTTGGGAATCAAGTATGATCCTTCAACAGGTATCTATGGTATGGACTTTTATGTTGTACTGGAACGTCCTGGCTATCGTGTTGGCCGCCGTCGTAGGTGCAAGTCTCGCGTTGGTATTCAGCATCGTGTCACAAAGGAAGATGCCATGAAGTGGTTTCAGGTGAAATATGAAGGTGTGATCCTTAACAAAGCTCAGACCATCGTTGGTTAG 696 0.4555 MKLRHRHSSHSFIKTLAARQYPLSLDFFPPHSASRPLQFLLGFNLNGKSFASEKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKAQTIVG 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g1688 231 Pfam ribosomal L5P family C-terminus 115 213 IPR031309 -
Alju10g1688 231 Gene3D - 51 226 IPR022803 -
Alju10g1688 231 SUPERFAMILY RL5-like 57 222 IPR022803 -
Alju10g1688 231 ProSitePatterns Ribosomal protein L5 signature. 88 104 IPR020929 GO:0003735|GO:0005840|GO:0006412
Alju10g1688 231 Pfam Ribosomal protein L5 58 111 IPR031310 -
Alju10g1688 231 FunFam 60S ribosomal protein L11 51 223 - -
Alju10g1688 231 PANTHER 60S RIBOSOMAL PROTEIN L11-RELATED 43 225 IPR002132 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g1688 Alju-ChrAlju10 25030555 25032623 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g1688 50 231 Cytoplasmic Ribosomal Protein Gene Family AT5G45775 94.505 7.07e-129 359