Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g1680 ATGGAGGATAAGACAGAAGGAAAAGCTGAATTACAGAATGCGCCATCTTCAGTTGTTGCTGTATGTATCAAGGGTAGCAAGAAAAGCAAAAGTGTATTACAGTGGGCACTCAAGAGGTTTGTGCCTGAAGGGAGAATCATGTTTAAGCTGATACATGTCCATGCCAGCATAAAAGGAGTACCAACACCAATGGGAAATTTTATCCCTATTTCACAAGTGCGTCCTGATGTAGCAGATGCCTTCAAAAAGGAAGTTGAGTGGCAGAAAAGTCAAATGCTTCTACCCTATAAAAATATGTGTGATCAGAAAAAGGTATATGTAGATACAGTGGTGATCGAATCTGATGATGTTGCAACTTCTATAGCCGAAGAAATTGCTAAGGGTGCTGTGACCAAACTCGTTATTGGAGCACCATCTCGTAGCATATTTTCTAGCAAGCTTAAGGGCGTTGCTGCAAAAATATCAGTTTGTACTCCAAGATTTTGTACAGTTTATGCTATTTCCAAAGGAAAATTGTCTTCTGTACGGCCATCAGATATACAGATCGATGAGAGTTTTATAGATAACAGTAGTGAAGCCAATGTTTCCACCAGTTCATCAAGCTACACTTCCACCTCTCAATCAGACTCTCTCACAGTTGCTTCATATGGTCCTTCAAATTCCTCTTTAAAAGACCAGCGATTTCAAGCTCTTTCCTCTATTAATCAGACCGTCCTAAGTGCAAATCCTAGTTTTATTGAATCTAACCATTCTAGATCTCAGTCCCTTGATATTGGAACAGAGATTAATGTTACAAGATTGTCTGCTAGAAATTCTAGTATTGGCTATGGTATCAGTCGGGCTTCTAGTTGCCAAAGCTTGAAATCAGAAACAGAATCATGTGTTCATGTTCAAAATTCCACCATTGATGTGTCGCCAGCAACTGAATCTCCTTCTCCTGTTAGGCAGGAAAATATTACCCTTGAGCTAGAAAAGTTGAGGATAGAATTAAGACATGCCCAAGGAATGCATGCAATAGCTCAAAGTGAGAACATTGATGCATCACGGAAGCTGAATGATCTAAACAAGAGACGATTGGACGAATTAATGAAACACAATGCGATTATTGCAAAGGAAGAGTTGGCAAAAGAATCATTAAGGAAAGAGAGAGAGAAATATGAAGCTGCAAAAAGAGAAGCTGAATATATGAAAGAGTGTGTTGAAAGGGAAGCTGCAGAAAGAGTAGACGCGGAGATAAAAGCTGTTCGTGCTGCACAAGAGAAAGAAAAGCTAGAGTCTGCTCTTACTGGTTCGACACCTCAGTACCATAAGTTTACCTGGGACGAGATAGCGTCTGCTACCTTATCTTTCTCTGAAGATCTGAGAATCGGAATGGGAGCATATGGTACAGTGTATAAGTGTAATTTGCATCATACTGTTGTAGCTGTTAAAGTACTCCACTCTAAAGGAAGCCACAAAAGCAAGCAATTCCAACAGGAGCTAGAAATCTTGTCCAGAATTCGTCATCCTAATTTGCTGCTCCTTCTTGGTGCATGTCCTGATAATGGATGTCTTGTATATGAGTATTTGGAGAATGGTAGCTTGGAGGATCGGTTATTCAGGAAAAACAGCACGGCCCCAATTCCTTGGTATGATAGGTACCGGATTGCATGGGAAGTAGCATCAGCCCTTACTTTTCTTCACAGCTCAAAGCCGACACCCATCATCCACCGCGATTTAAAACCAGCAAACATTTTGCTTGACAGTAACTTAGTGAGCAAGATTGGTGATATTGGTCTTTCTACTGTGCTCAGTTCAGATGTCTCCTCTACCATGTACAAGGACACAGCACCTGTTGGGACCCTTTGCTACATAGATCCAGAGTATCAAAGGACCGGATTGGTATCTCCAAAATCCGATGTGTATGCTTTTGGAATGGTGATCTTACAATTATTGACGGCAAAACCAGCTATAGCACTCACTCATGTGGTAGAAACAGCGGTTGATGATGGAAAACTCACAGATATATTGGACCCGGAGGCAGGGAGTTGGCCACTTCAGGAGACAATGGACTTGGCCCGATTAGGACTAAGCTGTACAGAACTCCGTCGTAGAGACCGACCAAATTTAGATCATGTGATTCCTGAACTGGAACGATTGAAAGAAGTTGCTGGCAGAGCCCAAAGTTCCAGTCTTGGTGTTAAATCAAAACCTCCTAATCATTTTATTTGCCCAATACTCCAGGATGTGATGGATGATCCTTGTGTTGCTGCGGATGGATATACATACGATCGCAAAGCGATCGAAACATGGCTTCAAGAGAACGACAAATCACCGATGACTAATATGGAACTTCCTCATAAGAACATAATCCCTAATTACACACTTCTATCAGCAATTATGGAGTGGAAGTCTGGAGGAAAATGA 2406 0.414 MEDKTEGKAELQNAPSSVVAVCIKGSKKSKSVLQWALKRFVPEGRIMFKLIHVHASIKGVPTPMGNFIPISQVRPDVADAFKKEVEWQKSQMLLPYKNMCDQKKVYVDTVVIESDDVATSIAEEIAKGAVTKLVIGAPSRSIFSSKLKGVAAKISVCTPRFCTVYAISKGKLSSVRPSDIQIDESFIDNSSEANVSTSSSSYTSTSQSDSLTVASYGPSNSSLKDQRFQALSSINQTVLSANPSFIESNHSRSQSLDIGTEINVTRLSARNSSIGYGISRASSCQSLKSETESCVHVQNSTIDVSPATESPSPVRQENITLELEKLRIELRHAQGMHAIAQSENIDASRKLNDLNKRRLDELMKHNAIIAKEELAKESLRKEREKYEAAKREAEYMKECVEREAAERVDAEIKAVRAAQEKEKLESALTGSTPQYHKFTWDEIASATLSFSEDLRIGMGAYGTVYKCNLHHTVVAVKVLHSKGSHKSKQFQQELEILSRIRHPNLLLLLGACPDNGCLVYEYLENGSLEDRLFRKNSTAPIPWYDRYRIAWEVASALTFLHSSKPTPIIHRDLKPANILLDSNLVSKIGDIGLSTVLSSDVSSTMYKDTAPVGTLCYIDPEYQRTGLVSPKSDVYAFGMVILQLLTAKPAIALTHVVETAVDDGKLTDILDPEAGSWPLQETMDLARLGLSCTELRRRDRPNLDHVIPELERLKEVAGRAQSSSLGVKSKPPNHFICPILQDVMDDPCVAADGYTYDRKAIETWLQENDKSPMTNMELPHKNIIPNYTLLSAIMEWKSGGK 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g1680 801 CDD STK_N 18 170 - -
Alju10g1680 801 Coils Coil 407 427 - -
Alju10g1680 801 ProSitePatterns Protein kinases ATP-binding region signature. 456 477 IPR017441 GO:0005524
Alju10g1680 801 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 19 154 - -
Alju10g1680 801 ProSiteProfiles Protein kinase domain profile. 450 713 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju10g1680 801 Gene3D HUPs 8 151 IPR014729 -
Alju10g1680 801 Gene3D Transferase(Phosphotransferase) domain 1 523 728 - -
Alju10g1680 801 SMART Ubox_2 734 796 IPR003613 GO:0004842|GO:0016567
Alju10g1680 801 Gene3D Phosphorylase Kinase; domain 1 418 522 - -
Alju10g1680 801 Pfam Protein kinase domain 453 705 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju10g1680 801 Coils Coil 323 357 - -
Alju10g1680 801 CDD RING-Ubox_WDSUB1-like 732 786 - -
Alju10g1680 801 SUPERFAMILY RING/U-box 724 797 - -
Alju10g1680 801 Coils Coil 362 403 - -
Alju10g1680 801 MobiDBLite consensus disorder prediction 192 216 - -
Alju10g1680 801 Pfam U-box domain 732 797 IPR003613 GO:0004842|GO:0016567
Alju10g1680 801 ProSiteProfiles U-box domain profile. 730 801 IPR003613 GO:0004842|GO:0016567
Alju10g1680 801 SMART serkin_6 450 749 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju10g1680 801 CDD STKc_IRAK 456 713 - -
Alju10g1680 801 PANTHER OS02G0152300 PROTEIN 18 795 - -
Alju10g1680 801 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 730 800 IPR013083 -
Alju10g1680 801 ProSitePatterns Serine/Threonine protein kinases active-site signature. 568 580 IPR008271 GO:0004672|GO:0006468
Alju10g1680 801 SUPERFAMILY Protein kinase-like (PK-like) 431 710 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g1680 Alju-ChrAlju10 24746090 24752402 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g1680 16 798 U-box Gene Family AT4G25160 51.838 0.0 819
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Alju10g1680 Pkinase 3e-40 CL0016