Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g1664 ATGGACTATGGATCCAATGCTCAACTCATACCTGATGATGAAGTGAGAATTCTGAAAGTAATATCATCAAAGATAGAGAATTTGAATTGGAATGTGACCTCACGTTCTTGTATCGATGGAGGCTTAAAAAATGAGACCATTGATATAGACAATAGCATCACAAGGAATGTAACATGCAATTGTAGTTTCTCAAGCGGAAAAGTTTGCCATGTTACAAATATCCGCGTGACGGGTACGAATCTCTCTGGATTTTTACCAAGTGAATTTGGGTATTTTACCCATTTGCAAGACCTTGATTTGTCATATAATAGTCTGAACGGATCAATCCCAAAGAGTTTTTCTAGACTCCCTCTGGTTACATTACGCCTTACGGGTAACCCAATTAGTAGTCAAATTCCAAAAGAAATTGGTGAAATTACAACCTTGGAGGATTTAGAGTTGGTAGATAATCTGTTGGAAGGAACTCTTCCTTCTAGTATCGGAAAATTGAAGCAGTTACGCAAATTGGATCTTTCTGGAAATAATTTCTCCGGGTCGTTACCTGAAAGTTTTGGCAATCTAAAGAAACTAGAATATATTGCATTAGATGGGAGCGATATAACAGGAAACCTACAAGATTTTGTTGGGAATTGGACCGAACTGAGGCAACTGTATTTACAAGGAACTTCTCTGCGAGGCCCTATTCCAACAACTATATCTCAATTGACAAATTTGACTGTGTTATATATAAGTGACTTGCTTGGACCAGCGACAATGGGATTTCCTAATCTGGATAATTTGACATCTCTGCGATTCTTGGTGTTGAGAAATTGTTCCATACATGATTCTATTCCAAGTTACATTGGTGAAATGGCAGACTTATATACTCTAGATTTGAGCTTCAACAAATTGATTGGTGAAATTCCAAACAACATAAATGACTTGACCTCCCTAAAGTACATGTTTCTAAATGAAAATTCTCTGAGTGGGAAAGTTCCTGAATGGATACTGCAAAACATAGATGATTATTTCGATCTATCTCACAACAATTTTTCTGGGACTTCAGCGGTTACTTGTCAGTACAATAATATAAACCTGGCTTCAAGCCTATCATCTTCAGCAAAAACCTCACGCACTTGCCTGAAGAGGGGCCTTCCTTGTGAAGGAAAACCCAAGTATAATTCGTTGTTCATAAATTGTGGAGGACCAGAAATTGAATATAACGGGAATAAATACGAAGAGGACACCAATCCTGGGAGTATTTCATTCTTTTTTCTTAGTGAAGATAAATGGGCTTATAGCAGCACAGGAAGATACTTTGAAAGATCTGATAATAAATACTTAGTAACAAACAAATTTTCTCTCAACATTAATGGTCCTGACTTCTACCAAACAGCTTGCCTTTCTCCTTTGTCTCTCAAATATCAAGGTCTCTGCATGATTAATGGAAATTACAACGTCAAGCTACACTTTGCTGAAATTATGTATTCTAATGACCAAAATTTCAGCGGCCTTGGAAGGCGCATATTTGATGTTTCTATTCAAGGTAGGAAATATTTGCGTGATTTCAACATTATGAAGGAAGCTGGTGGAGTTGGTAAGGGCATTGTCAAGGGCTTTAACGTGGATGTCAATAATAACACCTTGGAGATTCATTTATATTGGGCTGGGAAAGGAACTTATTATATTCCTGATATTGGTGTAAATGGACCTCTTATATCTGCTATTTCAGTCAGCCCAAACTTCAAAATTCAACGGAATTCTACTGGAGCCATTGCTGGAATTGTGATTGGATCCTGCTTGTTCCTCATCATACTAATAGTATTTGTCCTTCGAAGGATGGGTTTCCTAGGTGGCAAAGATTCAAAAGACAAACAACTTTTAGATCTAAAAACAGGGTATTTCTCTTTGAAACAAATCAAAGATGCCACTAATAACTTTGCTCCAGAAAATAAGATTGGTGAAGGAGGTTTTGGACCAGTGTACAAGGGTGTACTATCAAATGGTGTCATCATAGTCGTCAAGCAGCTTTCCTCCAAATCAAAGCAAGGGAATTGCGAATTTGTTAATGAAATTGGGATGATATCTGCTTTGCAACACCCAAACCTTGTGAAGCTTTATGGCTGTTGCATTGAAGGAAACCAGTTGTTACTGATATACGAATATATGGAGAACAACAGTCTTGCTAGTGCTCTTTTTGGTAGCCAAGGACGAAAGATACACTTGGATTGGCCTACAAGAATGAAAATATGTGTAGAGATAGCGAGAGGATTAGCTTATCTTCATGAGGAATCAAGGTTGAAAATTGTGCATAGAGATATTAAGGCAACAAATGTCTTACTTAATAAAGATTTTAGTGCCAAGATCTCAGATTTTGGTTTAGCTAAGCTTGATGAAGAGAATACTCATATTAGCACAAGAATAGCAGGAACAATTGGTTATATAGCTCCTGAATATGCAACACGAGGATACTTGACTGACAAAGCAGATGTTTATAGTTTTGGAGTTGTTGCTTTGGAAATTGTTAGTGGAAAAAACAACACAAGTTACAGGCCAAAAGAGGAATTTTTTTATCTTCTTGATTGGTTTTCTCGTGATGGATAA 2583 0.3709 MDYGSNAQLIPDDEVRILKVISSKIENLNWNVTSRSCIDGGLKNETIDIDNSITRNVTCNCSFSSGKVCHVTNIRVTGTNLSGFLPSEFGYFTHLQDLDLSYNSLNGSIPKSFSRLPLVTLRLTGNPISSQIPKEIGEITTLEDLELVDNLLEGTLPSSIGKLKQLRKLDLSGNNFSGSLPESFGNLKKLEYIALDGSDITGNLQDFVGNWTELRQLYLQGTSLRGPIPTTISQLTNLTVLYISDLLGPATMGFPNLDNLTSLRFLVLRNCSIHDSIPSYIGEMADLYTLDLSFNKLIGEIPNNINDLTSLKYMFLNENSLSGKVPEWILQNIDDYFDLSHNNFSGTSAVTCQYNNINLASSLSSSAKTSRTCLKRGLPCEGKPKYNSLFINCGGPEIEYNGNKYEEDTNPGSISFFFLSEDKWAYSSTGRYFERSDNKYLVTNKFSLNINGPDFYQTACLSPLSLKYQGLCMINGNYNVKLHFAEIMYSNDQNFSGLGRRIFDVSIQGRKYLRDFNIMKEAGGVGKGIVKGFNVDVNNNTLEIHLYWAGKGTYYIPDIGVNGPLISAISVSPNFKIQRNSTGAIAGIVIGSCLFLIILIVFVLRRMGFLGGKDSKDKQLLDLKTGYFSLKQIKDATNNFAPENKIGEGGFGPVYKGVLSNGVIIVVKQLSSKSKQGNCEFVNEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYMENNSLASALFGSQGRKIHLDWPTRMKICVEIARGLAYLHEESRLKIVHRDIKATNVLLNKDFSAKISDFGLAKLDEENTHISTRIAGTIGYIAPEYATRGYLTDKADVYSFGVVALEIVSGKNNTSYRPKEEFFYLLDWFSRDG 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g1664 860 Gene3D Phosphorylase Kinase; domain 1 610 715 - -
Alju10g1664 860 ProSiteProfiles Protein kinase domain profile. 640 860 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju10g1664 860 Gene3D Ribonuclease Inhibitor 21 143 IPR032675 -
Alju10g1664 860 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 255 348 - -
Alju10g1664 860 FunFam Os07g0541700 protein 716 804 - -
Alju10g1664 860 SMART serkin_6 640 856 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju10g1664 860 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 21 856 - -
Alju10g1664 860 CDD STKc_IRAK 646 856 - -
Alju10g1664 860 SUPERFAMILY Protein kinase-like (PK-like) 624 851 IPR011009 -
Alju10g1664 860 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 386 574 - -
Alju10g1664 860 Pfam Malectin domain 388 569 IPR021720 -
Alju10g1664 860 SUPERFAMILY L domain-like 63 328 - -
Alju10g1664 860 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 157 247 - -
Alju10g1664 860 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 63 156 - -
Alju10g1664 860 Pfam Protein tyrosine and serine/threonine kinase 643 849 IPR001245 GO:0004672|GO:0006468
Alju10g1664 860 Gene3D - 387 574 - -
Alju10g1664 860 Pfam Leucine rich repeat 70 128 IPR001611 GO:0005515
Alju10g1664 860 Pfam Leucine rich repeat 141 200 IPR001611 GO:0005515
Alju10g1664 860 Gene3D Ribonuclease Inhibitor 145 247 IPR032675 -
Alju10g1664 860 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 611 715 - -
Alju10g1664 860 ProSitePatterns Serine/Threonine protein kinases active-site signature. 762 774 IPR008271 GO:0004672|GO:0006468
Alju10g1664 860 Gene3D Transferase(Phosphotransferase) domain 1 716 859 - -
Alju10g1664 860 SMART LRR_typ_2 163 186 IPR003591 -
Alju10g1664 860 SMART LRR_typ_2 308 332 IPR003591 -
Alju10g1664 860 SMART LRR_typ_2 92 116 IPR003591 -
Alju10g1664 860 SMART LRR_typ_2 260 284 IPR003591 -
Alju10g1664 860 CDD TM_EGFR-like 581 606 - -
Alju10g1664 860 Gene3D Ribonuclease Inhibitor 248 365 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g1664 Alju-ChrAlju10 23731503 23747296 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g1664 3 855 Receptor kinase-like Gene Family AT1G53440 56.286 0.0 954
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Alju10g1664 PK_Tyr_Ser-Thr 5.1e-47 CL0016