Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g1629 ATGGATGCCTCATCCAGTACATGTGAGATAGTGGAATCAAGAGAAGAGATTATTTCTGAGTTCAGAATGGATGAAAAAGCTGAGAGTAGTTATGCCCACAGAGCAGGGAAAAAGTATTCTGTAGAGGATGATATTGATCGTCTCTTCCAAGCTATTGACTTCAAAAATTCAGCTAGAGGTTCTAATACACCACGTTCTCAAAAGAGTGCTCTTAAAAGGCCAATAAAAGTCAGTTCGTCTCAGGCGTCAGGAATTGGGATTGCAGAGCCTGCAAGTTTAAAGCAGGCACTTAGAGGACTTTGCATATCTCAGGCATCAGAGATGGCTGCTTTGAAGCGACTATCAAAGCCGTCCAGTTCATCTAGAGCATCTGAGGCAGGAACTATTAAGAAGCTGTATACAGCAGTGGTAGATGAGGGGAAAGGGAACTTGGTGGAAATCTCCCTTGTGCCTGAGATATCTGCACCTTCTGGTAAAATGCCTAGGGAAAATAAGCCAAGTTCAAATGCTGATCATTCTACTGATTTTGTTGATGTAACAAACCCACAAACAGTCACAACCAGGGTAGCATCCCGGGATCAGATTGTTCCTCTTCAACCAGAAGGTGGAAGTGAGAAGTTAGTCACAGTTGCCAGAAAACCTGTACTTCCAAATCCATCCACAGTTGATTATGGAAGTGAGGAAATATCTGAGGTCAAGATTGTCTCTGCTTCCTCAAGCAAAGCTTCCCACTGCTCTACAATGCTCGATAAGGGGCAGGAAGTAGACTTACATTCTGAGACTAATCAACCAAGCTCTAGTACGAGCAGCGGAGTGGAGAAATCCACAAGCAGTACTACATGTTTGGCAAAGCCAATGTTCAGGAACATGAGCTTCCTTAGGAAAAAAGTAAAGCAAGAATTATGTTCTACCTCAAGTGGCTCCACACTGTGTACCAGAAAAGTTGACAATGACTTGGATCCTAGTACGAGTAATTTGAACAAGGAGACTGATAAATATAATTTGAAGCAGGAAATGAAAGAAAATGATAAATTGTCTCCCAGCAGTTCAAATCACAGTGTTGAAGTAAATTCAAATATTGTGGGTGCAGATTCAATGAAAACTGGTTTCAGTATGAATTGCAGTAAGAAAACTAAATTTCTAGTAACAAAAATTGATGAAAAATCAAGATCAAAAGAAAAGGGTGAATTTTCCCAGAGCTCAAAAAGCAGCATTGGTGAGTATAGTAGCAGTACAACGACAAGCACAAGTGAAGAGAGCAATCTGAGTGGTTCTAGTCGCAGTGGCCACAGGCCTCACATGTCGAAACACTTGAGATGGGAAGCTGTTCGTGCTATTCAGCAGCAGCATGGGAACTTAAGTTTGAAGCACTTCAAACTGCTAAGGAGGCTTGGTTGTGGGGACATTGGAACTGTTTATCTTGCAGAACTAATTAGTACAAGCTGTCTTTTTGCTTTGAAAGTGATGGATAATGAGTTCTTGGCCAACCGGAAGAAAACTTTCAGGGCCCAAACTGAGAGAGAGATCCTGCAGATGCTGGATCATCCTTTTCTTCCTACCCTGTATGCCTATATTACAACTGATAAGCTCTCTTGCTTGGTTATGGAGTATTGCCCAGGTGGAGATCTACATGTGCTGCGCCAGAGGCAACCATATAGGAGTTTCTCAGAACAAGCAACCAGGTTTTATGTTGCTGAAGTTCTCCTTGCCCTGGAGTATTTGCACATGCTAGGAGTCATATATCGAGACCTGAAGCCTGAAAATATCCTTGTTCGAGAAGATGGCCACATTATGTTGACAGATTTTGACTTATCACTTAGGTGTTCTGTGAATCCAACGTTAGTCAAGTCATCTTCACCGGATGTGGATTCAACAAAGAAGATGTCCAGTCCTTGTGCAGAGGCTAGCTGCATACACCCTTTCTGTCTACAACCTGATTGGCAAGTGTCATGTTTCACTCCTATTCTTATATCTGCCGGAGCAAAATCTCGAAAGATGAAGTCTGAGGCTGCCCAGGTTGGTCCCCTGCCACAACTGGTCGTTGAGCCAACCAGTGCCCGCTCTAACTCATTCGTTGGTACCTACGAATACCTTGCTCCAGAAATCATCAAAGGCGAGGGCCATGGGAGTGCTGTGGATTGGTGGACTTTTGGTATATTTTTGTTTGAGCTTTTGTATGGCAAGACTCCCTTCAAAGGAGCTGGAAATGAGGAAACACTATCCAATGTTGTGTCACAAAGCCTCAAGTTCCCAGATGCTCCTATTGTCAGTTTTCATGCGAGAGATCTGATACGCGGATTGTTGATAAAAGACCCGGAGAACCGGTTAGGTTCTGTAAAAGGTGCCGCAGAGATAAAACAACACCCTTTCTTTGAAGGCCTAAACTGGGCTCTGATAAGATGTGCAGCACCACCTGAGCTGCCCAGGTTTCGTGATTTCGGAAGTTGTGTTCCTTCCATGGCTTCACAGAAGGAGAATGCGAATGATTTAGAGGATACAGAAGATTGTGAGGAGTTTGAGCTGTTTTAG 2529 0.4334 MDASSSTCEIVESREEIISEFRMDEKAESSYAHRAGKKYSVEDDIDRLFQAIDFKNSARGSNTPRSQKSALKRPIKVSSSQASGIGIAEPASLKQALRGLCISQASEMAALKRLSKPSSSSRASEAGTIKKLYTAVVDEGKGNLVEISLVPEISAPSGKMPRENKPSSNADHSTDFVDVTNPQTVTTRVASRDQIVPLQPEGGSEKLVTVARKPVLPNPSTVDYGSEEISEVKIVSASSSKASHCSTMLDKGQEVDLHSETNQPSSSTSSGVEKSTSSTTCLAKPMFRNMSFLRKKVKQELCSTSSGSTLCTRKVDNDLDPSTSNLNKETDKYNLKQEMKENDKLSPSSSNHSVEVNSNIVGADSMKTGFSMNCSKKTKFLVTKIDEKSRSKEKGEFSQSSKSSIGEYSSSTTTSTSEESNLSGSSRSGHRPHMSKHLRWEAVRAIQQQHGNLSLKHFKLLRRLGCGDIGTVYLAELISTSCLFALKVMDNEFLANRKKTFRAQTEREILQMLDHPFLPTLYAYITTDKLSCLVMEYCPGGDLHVLRQRQPYRSFSEQATRFYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVNPTLVKSSSPDVDSTKKMSSPCAEASCIHPFCLQPDWQVSCFTPILISAGAKSRKMKSEAAQVGPLPQLVVEPTSARSNSFVGTYEYLAPEIIKGEGHGSAVDWWTFGIFLFELLYGKTPFKGAGNEETLSNVVSQSLKFPDAPIVSFHARDLIRGLLIKDPENRLGSVKGAAEIKQHPFFEGLNWALIRCAAPPELPRFRDFGSCVPSMASQKENANDLEDTEDCEEFELF 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g1629 842 MobiDBLite consensus disorder prediction 258 279 - -
Alju10g1629 842 ProSiteProfiles Protein kinase domain profile. 458 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju10g1629 842 SMART serkin_6 458 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju10g1629 842 CDD STKc_phototropin_like 456 814 - -
Alju10g1629 842 MobiDBLite consensus disorder prediction 56 75 - -
Alju10g1629 842 MobiDBLite consensus disorder prediction 155 177 - -
Alju10g1629 842 SUPERFAMILY Protein kinase-like (PK-like) 431 810 IPR011009 -
Alju10g1629 842 MobiDBLite consensus disorder prediction 256 279 - -
Alju10g1629 842 MobiDBLite consensus disorder prediction 391 434 - -
Alju10g1629 842 FunFam serine/threonine-protein kinase D6PK-like 686 809 - -
Alju10g1629 842 Pfam Protein kinase domain 459 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju10g1629 842 Pfam Protein kinase domain 688 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju10g1629 842 FunFam Serine/threonine-protein kinase D6PK-like 456 541 - -
Alju10g1629 842 Gene3D Phosphorylase Kinase; domain 1 457 541 - -
Alju10g1629 842 FunFam serine/threonine-protein kinase D6PK-like 542 609 - -
Alju10g1629 842 ProSitePatterns Serine/Threonine protein kinases active-site signature. 579 591 IPR008271 GO:0004672|GO:0006468
Alju10g1629 842 Gene3D Transferase(Phosphotransferase) domain 1 542 608 - -
Alju10g1629 842 Gene3D Transferase(Phosphotransferase) domain 1 685 808 - -
Alju10g1629 842 PANTHER FLIPPASE KINASE 1-RELATED 275 810 - -
Alju10g1629 842 MobiDBLite consensus disorder prediction 312 335 - -
Alju10g1629 842 MobiDBLite consensus disorder prediction 312 330 - -
Alju10g1629 842 MobiDBLite consensus disorder prediction 398 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g1629 Alju-ChrAlju10 21978705 21982873 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g1629 1 842 AGC Kinase Gene Family AT3G52890 45.720 0.0 710
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Alju10g1629 Pkinase 2e-36 CL0016