Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju10g1627 ATGGAGAAAGCTCATGAGCTTTCTATACTCTATGGGGTTGACTGTTGCTTGATCATGCATAGCTCTAACTCAATTAATTACCTTCCTGATATTTGGCCTCAAGATCCTATACAGTACAAGGCAAAGATCGCTAAGAAAAGTCCCAAGAAGTACAATGTGACAGAGTTCTTCAAGGACAAGAAGAACAAGGTAGAAGCCAAAGCGTACAAACTACGACAAGAGAGACTCCGAAAGCTCTATCCGATGTGGGACTTCTCTTTTGACAAACTTAACGAAGACCAGCTGAGGATGTTTGTTTCCCTCTTGGATTCCAAGATCAAACAATGCAAGGATAGGATCAGCATGTTAAAGAAGTAG 357 0.4118 MEKAHELSILYGVDCCLIMHSSNSINYLPDIWPQDPIQYKAKIAKKSPKKYNVTEFFKDKKNKVEAKAYKLRQERLRKLYPMWDFSFDKLNEDQLRMFVSLLDSKIKQCKDRISMLKK 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju10g1627 118 SUPERFAMILY SRF-like 1 27 IPR036879 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju10g1627 Alju-ChrAlju10 21837242 21838203 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju10g1627 3 112 Type I MADS-box Gene Family AT5G58890 30.081 2.04e-09 51.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-M-type Alju10g1627 SRF-TF 0.00014 No_clan